iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ogu-078248

Ensembl Protein ID

OGLUM02G28370.2

UniProt Accession

A0A0D9YWE7; A0A0D9YWE7_9ORYZ

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
OGLUM02G28370	OGLUM02G28370.1	OGLUM02G28370.1
OGLUM02G28370	OGLUM02G28370.2	OGLUM02G28370.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.30e-18	67.4	148	184

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf...sdtllvsGsdDgtikvWDlrtgvl 35
           gH+  vt++a+   s + l sGs Dgt+++WD  tg +
   Q: 148  GHEKVVTGIALpagS-DKLYSGSKDGTVRMWDCQTGQC 184
           8**********9754.899***************9988 PP

Organism

Oryza glumaepatula

Protein Sequence
(Fasta)

MDIETDGRFG NKRVHHRLGP ANGAASSSTS GKVCIHWRAG RCNRFPCPYL HSELPEATAK 60
RPSQSGGGGN VWRNPHSGGG GGRGAGGAGG PNKWGRAPGG ADGGPRHKVP DRPCRYFLAG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GAACCCATCT CAGCTCACCC GCAGTCGCGC GACCCTGGGA AAAAAGGGCC ACCCATCAGT 60
GCCTTCTCCT CTCCTCTCTC TTCTCTTCTC TCTCTCCGAT CCGGATCTCC CTACCCACTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR020472--G-protein_beta_WD-40_rep
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom
IPR000571--Znf_CCCH

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION
PS50103--ZF_C3H1

Pfam

PF00400--WD40
PF00642--zf-CCCH

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40
SM00356--ZnF_C3H1

Gene Ontology

GO:0046872--F:metal ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002831	Amborella trichopoda	50.57	7.00e-121	426.00
IUUC-Aly-005699	Arabidopsis lyrata	52.78	3.00e-127	447.00
IUUC-Ath-007001	Arabidopsis thaliana	52.91	2.00e-128	451.00
IUUC-Bdi-014857	Brachypodium distachyon	79.54	0.00e+00	638.00
IUUC-Bol-016382	Brassica oleracea	51.95	3.00e-124	437.00
IUUC-Bra-017351	Brassica rapa	52.41	1.00e-125	442.00
IUUC-Gma-042894	Glycine max	50.45	2.00e-125	441.00
IUUC-Hvu-047824	Hordeum vulgare	74.86	5.00e-137	479.00
IUUC-Lpe-051596	Leersia perrieri	92.41	0.00e+00	684.00
IUUC-Mtr-058068	Medicago truncatula	52.08	6.00e-124	436.00
IUUC-Mac-065071	Musa acuminata	59.91	2.00e-144	504.00
IUUC-Oba-075769	Oryza barthii	99.48	0.00e+00	738.00
IUUC-Obr-076011	Oryza brachyantha	83.72	0.00e+00	691.00
IUUC-Oin-079981	Oryza indica	90.57	0.00e+00	730.00
IUUC-Olo-080571	Oryza longistaminata	99.19	0.00e+00	693.00
IUUC-Ome-081598	Oryza meridionalis	99.49	0.00e+00	748.00
IUUC-Oni-082711	Oryza nivara	99.75	0.00e+00	749.00
IUUC-Opu-083451	Oryza punctata	72.83	3.00e-175	607.00
IUUC-Oru-085129	Oryza rufipogon	99.74	0.00e+00	725.00
IUUC-Osa-085619	Oryza sativa	88.22	2.00e-159	553.00
IUUC-Ppa-096012	Physcomitrella patens	46.61	2.00e-86	312.00
IUUC-Pop-099994	Populus trichocarpa	51.01	3.00e-124	437.00
IUUC-Ppe-101609	Prunus persica	55.18	3.00e-136	477.00
IUUC-Smo-108900	Selaginella moellendorffii	42.51	4.00e-77	281.00
IUUC-Sit-109731	Setaria italica	73.79	9.00e-168	582.00
IUUC-Sly-111514	Solanum lycopersicum	51.28	2.00e-119	421.00
IUUC-Stu-112646	Solanum tuberosum	51.40	2.00e-123	435.00
IUUC-Sbi-114748	Sorghum bicolor	74.31	3.00e-178	617.00
IUUC-Tca-121658	Theobroma cacao	52.81	7.00e-125	439.00
IUUC-Tae-125577	Triticum aestivum	76.83	0.00e+00	628.00
IUUC-Tur-126095	Triticum urartu	82.27	4.00e-132	464.00
IUUC-Vvi-131444	Vitis vinifera	52.81	3.00e-130	457.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence