iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-017221

Ensembl Protein ID

Bra012803.1-P

UniProt Accession

M4D8J3; M4D8J3_BRARP

Protein Name

RING-type E3 ubiquitin transferase

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra012803	Bra012803.1	Bra012803.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	5.80e-33	113.8	6	79

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 1    evpeeflCpIslelMrdPvvlpsGitydrssIekwlasggk.tcPvtrqplteedlvPnltlrrliqawceens 73
           ++p +flCpIsl++M+dPv++++Gitydr +Iekwl +g++ +cPvt+q +te+dl+Pn+tlrrliq+wc  n+
   Q: 6    DIPCFFLCPISLDIMKDPVIVSTGITYDRDNIEKWLFTGKNnSCPVTKQVITETDLTPNHTLRRLIQSWCTLNA 79
           58999*******************************888888****************************9876 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MDQEIDIPCF FLCPISLDIM KDPVIVSTGI TYDRDNIEKW LFTGKNNSCP VTKQVITETD 60
LTPNHTLRRL IQSWCTLNAS YGIERIATPK PLISKSEIEK LIKDSSSSYQ NQVKCLKRLR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGATCAAG AGATAGATAT TCCTTGTTTC TTCCTATGTC CAATCTCTCT AGATATCATG 60
AAGGATCCGG TCATAGTTTC CACCGGGATA ACCTACGACA GGGACAACAT CGAGAAATGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bol-016060	Brassica oleracea	98.35	0.00e+00	831.00
IUUC-Obr-076599	Oryza brachyantha	30.82	1.00e-47	183.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence