iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Details
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Oin-079382

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

CM000131

Gene Name

OsI_22374

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
BGIOSGA022627	BGIOSGA022627-TA	BGIOSGA022627-PA

Status

Reviewed

Details

Family	Domain	References (PMIDs)
E3 activity/RING/U-box	U-box	24486490

Classification

Family	E-value	Score	Start	End
E3 activity/RING/U-box	1.40e-32	112.6	38	109

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceens 73
           vp+ f+CpIsle+MrdPv++p+Gitydr+s+e wla+g+ tcPvt++p++  dlvPn++ rr+iq+wc +n+
   Q: 38   VPANFVCPISLEMMRDPVTAPTGITYDRESVEGWLARGHDTCPVTGRPVRLADLVPNHATRRMIQDWCVANR 109
           8*******************************************************************9997 PP

Organism

Oryza indica

Protein Sequence
(Fasta)

MSRATRVAGR LMPEISLLRR GRKSAARGGD DAEVEVSVPA NFVCPISLEM MRDPVTAPTG 60
ITYDRESVEG WLARGHDTCP VTGRPVRLAD LVPNHATRRM IQDWCVANRA RGVERVPTPR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTCTCGCG CGACGAGGGT GGCCGGGAGG CTGATGCCAG AGATATCGTT GCTGAGACGG 60
GGGAGGAAGT CGGCGGCGAG AGGCGGCGAC GATGCGGAGG TGGAGGTGTC GGTGCCGGCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000169	Aegilops tauschii	64.49	1.00e-72	265.00
IUUC-Ath-007692	Arabidopsis thaliana	40.49	3.00e-63	234.00
IUUC-Bdi-014644	Brachypodium distachyon	74.07	1.00e-157	548.00
IUUC-Bra-017285	Brassica rapa	39.29	8.00e-67	246.00
IUUC-Gma-043233	Glycine max	44.85	3.00e-78	285.00
IUUC-Hvu-047616	Hordeum vulgare	66.35	2.00e-125	441.00
IUUC-Lpe-050701	Leersia perrieri	81.54	2.00e-160	557.00
IUUC-Oba-075106	Oryza barthii	76.40	2.00e-81	295.00
IUUC-Obr-076534	Oryza brachyantha	66.82	4.00e-120	424.00
IUUC-Ogl-077061	Oryza glaberrima	99.33	0.00e+00	654.00
IUUC-Ogu-078268	Oryza glumaepatula	99.55	1.00e-179	621.00
IUUC-Ome-081665	Oryza meridionalis	69.76	1.00e-124	438.00
IUUC-Oni-082958	Oryza nivara	99.55	0.00e+00	643.00
IUUC-Opu-083563	Oryza punctata	82.30	6.00e-131	459.00
IUUC-Oru-085171	Oryza rufipogon	99.69	8.00e-128	451.00
IUUC-Osa-086217	Oryza sativa	99.78	4.00e-180	623.00
IUUC-Smo-108932	Selaginella moellendorffii	37.16	2.00e-55	208.00
IUUC-Sit-109975	Setaria italica	79.78	7.00e-122	429.00
IUUC-Sbi-113869	Sorghum bicolor	74.45	6.00e-105	373.00
IUUC-Tae-124576	Triticum aestivum	77.91	2.00e-138	485.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence