iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099887

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

CM000344

Gene Name

POPTR_0008s13700g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0008s13700	POPTR_0008s13700.1	POPTR_0008s13700.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	2.50e-31	108.7	31	103

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceenss 74
           vp +f+Cp+sl+lM+dPv+++sGitydr+sIekw++ g+ tcP+t++ l++ d +Pn+t+r++iq+wc +nss
   Q: 31   VPNHFRCPVSLDLMKDPVTMSSGITYDRESIEKWIEAGNVTCPITNKVLRSLDSIPNHTIRKMIQDWCVANSS 103
           89*******************************************************************9986 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MMISTWRKRR EARLAGKQRL ESETGDIEVT VPNHFRCPVS LDLMKDPVTM SSGITYDRES 60
IEKWIEAGNV TCPITNKVLR SLDSIPNHTI RKMIQDWCVA NSSYGIERIP TPRIPVSSEE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGCACAAAAT TAATAACACG TTCATTCTTC CAAGTTCCAA CCAAAAAAAG GTACCGCTCG 60
CTACGTACCA TTCCTTCTTT CTTAAGTTAG TTGTTTCAAT TAAACATCAG GTACATGATG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

KEGG

pop:POPTR_0008s13700g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Lpe-050701	Leersia perrieri	43.40	1.00e-82	300.00
IUUC-Mac-065672	Musa acuminata	43.34	2.00e-87	315.00
IUUC-Obr-076534	Oryza brachyantha	44.27	2.00e-85	309.00
IUUC-Olo-080664	Oryza longistaminata	41.33	8.00e-55	206.00
IUUC-Ppe-101692	Prunus persica	62.05	7.00e-135	473.00
IUUC-Sit-109976	Setaria italica	46.50	4.00e-101	361.00
IUUC-Sly-110989	Solanum lycopersicum	56.18	7.00e-134	469.00
IUUC-Stu-112058	Solanum tuberosum	56.40	5.00e-135	473.00
IUUC-Sbi-114180	Sorghum bicolor	45.54	2.00e-87	315.00
IUUC-Tca-121201	Theobroma cacao	64.93	2.00e-156	544.00
IUUC-Tae-124576	Triticum aestivum	46.19	1.00e-84	306.00
IUUC-Vvi-131485	Vitis vinifera	67.27	5.00e-150	523.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence