iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sly-111577

Ensembl Protein ID

Solyc01g005160.2.1

UniProt Accession

Q1WM08; Q1WM08_SOLLC

Genbank Protein ID

AAZ57336.1; ADI46215.1

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

DQ118759; HM150714

Gene Name

CMPG1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Solyc01g005160.2	Solyc01g005160.2.1	Solyc01g005160.2.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	2.20e-29	102.1	29	109

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggk.tcPvtrqplteed.......lvPnltlrrliqawceenss 74
           +p++f CpIsl+lM+dPv+l++Gitydr++Iekw+++gg+ tcP+t+q+l++         l+Pn+ +r++iq+wc en+ 
   Q: 29   IPSQFTCPISLDLMKDPVTLSTGITYDRENIEKWINEGGNqTCPITNQELKSYGngivdpvLIPNHNIRKMIQQWCVENKE 109
           89*********************************999988*********876333333338***************9975 PP

Organism

Solanum lycopersicum

Protein Sequence
(Fasta)

MIATWRKKRT EKRVTKRGFM KKTNMELVIP SQFTCPISLD LMKDPVTLST GITYDRENIE 60
KWINEGGNQT CPITNQELKS YGNGIVDPVL IPNHNIRKMI QQWCVENKEH GIDRIPTPRI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATCCCTAACA AAACCAAAAA CCAAAAAAAG AAAAAATTAA ACTTCTTTTC GAGGCCTTCG 60
TTAGCTGATA TTTGTTTAGT CATTCAGATA GTGATTCACG TAGAGATGAT TGCAACATGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

KEGG

sly:778346

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000169	Aegilops tauschii	48.18	3.00e-55	207.00
IUUC-Bdi-014644	Brachypodium distachyon	43.56	3.00e-98	351.00
IUUC-Hvu-047616	Hordeum vulgare	45.41	2.00e-101	361.00
IUUC-Lpe-050847	Leersia perrieri	43.18	1.00e-92	332.00
IUUC-Mtr-057926	Medicago truncatula	48.02	2.00e-99	355.00
IUUC-Mac-065672	Musa acuminata	43.08	6.00e-87	313.00
IUUC-Obr-076534	Oryza brachyantha	42.73	5.00e-87	314.00
IUUC-Ome-081665	Oryza meridionalis	44.08	4.00e-90	324.00
IUUC-Stu-112581	Solanum tuberosum	93.81	0.00e+00	760.00
IUUC-Sbi-114336	Sorghum bicolor	42.49	7.00e-68	250.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence