iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Vvi-131485

UUCD1 version

UUC-ViV-00673

Ensembl Protein ID

VIT_01s0011g06140.t01

UniProt Accession

F6HFB5; F6HFB5_VITVI

Genbank Protein ID

CCB50764.1

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

FN595752

Gene Name

VIT_01s0011g06140

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
VIT_01s0011g06140	VIT_01s0011g06140.t01	VIT_01s0011g06140.t01

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	2.00e-32	111.6	32	103

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceens 73
           +p +f+CpIsl+lM+dPv+l++Gitydr+sIe w++ g++tcP+t+q l++ + +Pn+t+r++iq+wc en+
   Q: 32   TPNHFRCPISLDLMKDPVTLSTGITYDRESIEMWIEAGNRTCPITNQVLRSLEPIPNHTIRKMIQDWCVENR 103
           699******************************************************************997 PP

Organism

Vitis vinifera

Protein Sequence
(Fasta)

MISSWRRRRA GRRAAKLQQH AEDDIGSMEL TTPNHFRCPI SLDLMKDPVT LSTGITYDRE 60
SIEMWIEAGN RTCPITNQVL RSLEPIPNHT IRKMIQDWCV ENRSFGIERI PTPRIPLSSV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATCATCAGTT TATTCAATTG TTGAACGCAA ACCCAACACC ACAACTTGTA GATTTCCTTC 60
GTTTCCGAAC TAATTACCTA AATTTTCATA CGGGTTATTG GCAATGATTT CTTCTTGGAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

KEGG

vvi:100852659

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000169	Aegilops tauschii	48.76	3.00e-51	194.00
IUUC-Atr-003111	Amborella trichopoda	46.98	5.00e-105	373.00
IUUC-Aly-006171	Arabidopsis lyrata	49.63	1.00e-99	356.00
IUUC-Ath-007692	Arabidopsis thaliana	49.76	4.00e-95	340.00
IUUC-Bdi-014295	Brachypodium distachyon	50.36	5.00e-95	340.00
IUUC-Bol-016269	Brassica oleracea	48.35	6.00e-95	340.00
IUUC-Bra-017285	Brassica rapa	48.32	3.00e-97	347.00
IUUC-Gma-043443	Glycine max	59.86	1.00e-125	441.00
IUUC-Hvu-047616	Hordeum vulgare	51.33	2.00e-107	382.00
IUUC-Lpe-050847	Leersia perrieri	49.16	2.00e-94	338.00
IUUC-Mtr-057926	Medicago truncatula	57.04	6.00e-120	423.00
IUUC-Mac-064458	Musa acuminata	52.15	4.00e-100	357.00
IUUC-Oba-075321	Oryza barthii	39.85	7.00e-45	173.00
IUUC-Obr-076534	Oryza brachyantha	50.23	5.00e-97	347.00
IUUC-Ogl-076969	Oryza glaberrima	50.94	3.00e-101	361.00
IUUC-Ogu-078872	Oryza glumaepatula	48.85	3.00e-102	364.00
IUUC-Oin-079622	Oryza indica	50.94	3.00e-101	361.00
IUUC-Olo-080664	Oryza longistaminata	49.83	4.00e-64	237.00
IUUC-Ome-081665	Oryza meridionalis	50.49	1.00e-93	335.00
IUUC-Oni-082871	Oryza nivara	50.94	3.00e-101	361.00
IUUC-Opu-084061	Oryza punctata	50.71	2.00e-101	361.00
IUUC-Oru-084561	Oryza rufipogon	51.18	7.00e-102	363.00
IUUC-Osa-086045	Oryza sativa	50.94	3.00e-101	361.00
IUUC-Ppa-095659	Physcomitrella patens	42.24	6.00e-72	263.00
IUUC-Pop-099887	Populus trichocarpa	67.27	1.00e-157	548.00
IUUC-Ppe-101692	Prunus persica	69.42	8.00e-146	509.00
IUUC-Sit-109976	Setaria italica	52.13	4.00e-111	394.00
IUUC-Sly-110989	Solanum lycopersicum	59.28	3.00e-136	477.00
IUUC-Stu-112058	Solanum tuberosum	60.54	8.00e-143	499.00
IUUC-Sbi-114180	Sorghum bicolor	49.88	2.00e-93	335.00
IUUC-Tca-121201	Theobroma cacao	70.14	8.00e-166	575.00
IUUC-Tae-124576	Triticum aestivum	49.64	1.00e-93	335.00
IUUC-Tur-126397	Triticum urartu	55.74	1.00e-50	191.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence