iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sit-110689

Ensembl Protein ID

Si034396m

UniProt Accession

K4A692; K4A692_SETIT

Genbank Protein ID

KQK92968.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM003536

Gene Name

LOC101772029; SETIT_034396mg

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Si034396m.g	Si034396m	Si034396m

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	5.50e-29	99.9	417	450
UBD/Beta-Prp	2.20e-40	139.6	269	582

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf...sdtllvsGsdDgtikvWDlrt 32
           H++ vtc++f   +d++++sG+ Dg +++WD+ +
   Q: 417  HNNYVTCIQFkptNDDYFISGCIDGMVRIWDVPR 450
           999********9777****************966 PP

UBD/Beta-Prp

   S: 5    lkghhksvitcvkfspdksllatgsrdgtikvwdvttgkl............................................................ 44
           +k+h+ + +t +kfspd+++latg++dg ++vw+v +g                                                              
   Q: 269  IKAHEGAIVT-MKFSPDGQYLATGGEDGVVRVWRVVEGERpddrdfveddpscvfftvnenselapissceggkskhsksskgaadpacvliphrtfals 367
           5566666666.99999999999999999999999999999999999999999998888888887777777777777777777777777777777777777 PP
   S: 45   ...lrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfsp.sgdklvsGshdrtirvwdletgqcleetlsghdgvv 140
              ++++ gh++ + ++++s+++  l+++s D+t+++w +  ++c+ +++ h+++v++++f p ++d+++sG  d ++r+wd++  q++    +  +++v
   Q: 368  edpVHEFHGHDDVILDLSWSKNR-ELLSASMDKTVRLWKVGCNSCLKVFS-HNNYVTCIQFKPtNDDYFISGCIDGMVRIWDVPRCQVVD--WADSKEIV 463
           77777777777777777777776.47777777777777777777777777.777777777777444777777777777777777777776..66666777 PP
   S: 141  ncvvvhpdgnllvsGslDrtvrlWdlktgkllrtl....tgghtdsvysls....fdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksv.rfs 231
           + v++ pdg+  v G+l + +r +d++ + l  +      g ++++ + ++      s+ k l+  s d++v++ d    ++v  ++g ++  ++   f+
   Q: 464  TAVCYRPDGKGAVVGTLTGNCRYYDVSENHLELESqvplHGRKKSPLKRIIgfqyCPSDPKKLMVTSGDSQVRILDGV--HVVSNYKGLRSSSQVAaSFT 561
           777777777777777777777777776665555544455444455555555544433333777777777777777764..44777777665554431345 PP
   S: 232  pnderlvsgssDgsiriWdlr 252
           p++++++s+s+D si++W++ 
   Q: 562  PDGDHIISASDDSSIYMWNYA 582
           777777777777777777754 PP

Organism

Setaria italica

Protein Sequence
(Fasta)

MARFLGAGEE QEEFFDSREV LSPASVSSPA SSGRRDDGCL FDESLLEVWV RDPCSVQERR 60
QRFAKSMGLL DPSSHGARAD EEPCSRLEAT EEILPASPSA DLFSAAPTFA CRGGEPTASG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCGCGCT TCTTGGGTGC CGGGGAAGAG CAAGAGGAGT TCTTTGACTC GAGGGAGGTC 60
CTGTCGCCGG CGTCCGTCTC GTCGCCGGCG AGTTCCGGTC GTCGCGACGA CGGGTGCCTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

KEGG

sita:101772029

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000343	Aegilops tauschii	82.67	0.00e+00	812.00
IUUC-Atr-002755	Amborella trichopoda	44.42	6.00e-169	587.00
IUUC-Aly-005587	Arabidopsis lyrata	49.20	3.00e-131	461.00
IUUC-Ath-007681	Arabidopsis thaliana	49.80	9.00e-134	469.00
IUUC-Bdi-014664	Brachypodium distachyon	78.86	0.00e+00	1028.00
IUUC-Bol-016331	Brassica oleracea	41.98	3.00e-128	451.00
IUUC-Bra-017674	Brassica rapa	49.10	3.00e-118	418.00
IUUC-Gma-042979	Glycine max	43.63	1.00e-158	552.00
IUUC-Hvu-047828	Hordeum vulgare	79.96	0.00e+00	880.00
IUUC-Lpe-051594	Leersia perrieri	75.53	0.00e+00	885.00
IUUC-Mtr-057948	Medicago truncatula	52.98	1.00e-142	499.00
IUUC-Mac-065324	Musa acuminata	48.87	2.00e-175	608.00
IUUC-Oba-075653	Oryza barthii	73.99	0.00e+00	961.00
IUUC-Obr-076256	Oryza brachyantha	79.64	0.00e+00	1014.00
IUUC-Ogl-077818	Oryza glaberrima	77.28	0.00e+00	981.00
IUUC-Ogu-078138	Oryza glumaepatula	74.77	0.00e+00	970.00
IUUC-Oin-079480	Oryza indica	77.14	0.00e+00	981.00
IUUC-Olo-080838	Oryza longistaminata	77.41	0.00e+00	987.00
IUUC-Ome-081177	Oryza meridionalis	80.70	0.00e+00	1064.00
IUUC-Oni-082466	Oryza nivara	77.14	0.00e+00	981.00
IUUC-Opu-083616	Oryza punctata	79.52	0.00e+00	1000.00
IUUC-Oru-084265	Oryza rufipogon	74.12	0.00e+00	965.00
IUUC-Osa-085283	Oryza sativa	77.01	0.00e+00	980.00
IUUC-Pop-099728	Populus trichocarpa	45.81	4.00e-173	600.00
IUUC-Ppe-101700	Prunus persica	44.39	1.00e-162	566.00
IUUC-Sly-111162	Solanum lycopersicum	42.26	3.00e-150	525.00
IUUC-Stu-112019	Solanum tuberosum	42.02	4.00e-151	527.00
IUUC-Sbi-114128	Sorghum bicolor	87.63	0.00e+00	1195.00
IUUC-Tca-121635	Theobroma cacao	47.77	0.00e+00	630.00
IUUC-Tae-125734	Triticum aestivum	73.89	0.00e+00	972.00
IUUC-Tur-126616	Triticum urartu	76.04	0.00e+00	865.00
IUUC-Vvi-130979	Vitis vinifera	47.45	0.00e+00	644.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence