iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ocu-074124

Ensembl Protein ID

ENSOCUP00000003759.2

UniProt Accession

G1SLL7; G1SLL7_RABIT

Genbank Protein ID

ENSOCUP00000003759

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AAGW02061327

Gene Name

RBBP6

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSOCUG00000004346.3	ENSOCUT00000004351.3	ENSOCUP00000003759.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	8.30e-10	38.7	253	326
ULD/UDP/UFD/DWNN	2.50e-42	143.0	4	76

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlp.sGitydrssIekwl.asggktcPvtrqpl.teedlvPnltlrrliqawceen 72
           +p+e+lC I +++M+d vv+p +G +y  ++I+  l +s+++tcP+++q   +++ l+ n++lr+ ++++ +e 
   Q: 253  IPDELLCLICKDIMTDAVVIPcCGNSYCDECIRTALlESDEHTCPTCHQNDvSPDALIANKFLRQAVNNFKNET 326
           8********************************998677777*****9975599999*********99998765 PP

ULD/UDP/UFD/DWNN

   S: 1    vhykfksklnydtitfDGlhisvfDLkreiiqrekLgkaaDfdLqitnaqtkeeykDDafliPkntsvivkriP 74
           vhykf+sklnydt+tfDGlhis++DLk++i++rekL kaaD+dLqitnaqtkeey+DD++liPkn+sviv+riP
   Q: 4    VHYKFSSKLNYDTVTFDGLHISLCDLKKQIMGREKL-KAADCDLQITNAQTKEEYTDDNALIPKNSSVIVRRIP 76
           8***********************************.************************************9 PP

Organism

Oryctolagus cuniculus

Protein Sequence
(Fasta)

MSCVHYKFSS KLNYDTVTFD GLHISLCDLK KQIMGREKLK AADCDLQITN AQTKEEYTDD 60
NALIPKNSSV IVRRIPIGGV KSTSKTYVIS RSEPVMGTTK AIDDSSASIS LAQLTKTANL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GAATCCTTTG GCACCATGTC GTGTGTGCAT TATAAATTTT CCTCTAAACT CAACTATGAC 60
ACCGTCACCT TTGATGGGCT GCACATCTCC CTCTGCGACT TAAAGAAGCA GATTATGGGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR014891--DWNN_domain
IPR033489--RBBP6
IPR003613--Ubox_domain
IPR025829--Zn_knuckle_CX2CX3GHX4C
IPR001878--Znf_CCHC
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51282--DWNN
PS50158--ZF_CCHC
PS50089--ZF_RING_2

Pfam

PF08783--DWNN
PF04564--U-box
PF13696--zf-CCHC_2

SMART

SM01180--DWNN
SM00184--RING
SM00343--ZnF_C2HC

Gene Ontology

GO:0005634--C:nucleus
GO:0003723--F:RNA binding
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0006974--P:cellular response to DNA damage stimulus
GO:0048568--P:embryonic organ development
GO:0001701--P:in utero embryonic development
GO:0006397--P:mRNA processing
GO:0035264--P:multicellular organism growth
GO:0042787--P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process
GO:0006275--P:regulation of DNA replication
GO:0061053--P:somite development

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000195	Aegilops tauschii	35.71	3.00e-16	80.90
IUUC-Aml-001655	Ailuropoda melanoleuca	86.99	0.00e+00	1176.00
IUUC-Atr-002768	Amborella trichopoda	38.69	8.00e-18	85.50
IUUC-Apl-004100	Anas platyrhynchos	67.07	0.00e+00	861.00
IUUC-Aca-004345	Anolis carolinensis	64.87	1.00e-115	411.00
IUUC-Aly-006036	Arabidopsis lyrata	30.71	1.00e-34	141.00
IUUC-Ath-007648	Arabidopsis thaliana	32.16	5.00e-40	159.00
IUUC-Ago-007949	Ashbya gossypii	28.85	2.00e-34	139.00
IUUC-Acl-008118	Aspergillus clavatus	31.59	5.00e-27	115.00
IUUC-Afl-008408	Aspergillus flavus	32.08	5.00e-16	79.00
IUUC-Afu-008777	Aspergillus fumigatus	31.02	3.00e-35	143.00
IUUC-Ani-009426	Aspergillus nidulans	30.93	3.00e-36	146.00
IUUC-Ang-009735	Aspergillus niger	30.64	5.00e-33	135.00
IUUC-Aor-010213	Aspergillus oryzae	32.18	4.00e-35	142.00
IUUC-Ate-010474	Aspergillus terreus	30.56	2.00e-33	137.00
IUUC-Ame-010679	Astyanax mexicanus	70.10	4.00e-167	583.00
IUUC-Bgr-012229	Blumeria graminis	32.04	6.00e-37	149.00
IUUC-Bta-012672	Bos taurus	87.58	0.00e+00	1310.00
IUUC-Bci-013880	Botrytis cinerea	31.12	3.00e-35	143.00
IUUC-Bdi-014250	Brachypodium distachyon	28.27	2.00e-35	144.00
IUUC-Bol-015602	Brassica oleracea	36.84	6.00e-25	109.00
IUUC-Bra-016670	Brassica rapa	31.44	2.00e-38	154.00
IUUC-Cel-018532	Caenorhabditis elegans	37.17	1.00e-53	205.00
IUUC-Cja-018843	Callithrix jacchus	90.36	0.00e+00	1374.00
IUUC-Cfa-021107	Canis familiaris	89.29	0.00e+00	1297.00
IUUC-Cre-022712	Chlamydomonas reinhardtii	27.20	2.00e-12	67.40
IUUC-Csa-023397	Chlorocebus sabaeus	90.24	0.00e+00	1400.00
IUUC-Cho-024327	Choloepus hoffmanni	93.09	0.00e+00	846.00
IUUC-Cin-025439	Ciona intestinalis	48.90	9.00e-50	189.00
IUUC-Csv-026162	Ciona savignyi	54.98	2.00e-55	208.00
IUUC-Cgl-026629	Colletotrichum gloeosporioides	30.40	6.00e-29	122.00
IUUC-Cne-026921	Cryptococcus neoformans	29.34	2.00e-39	157.00
IUUC-Cme-027244	Cyanidioschyzon merolae	45.05	6.00e-18	86.70
IUUC-Dre-028023	Danio rerio	83.28	2.00e-162	567.00
IUUC-Dno-029430	Dasypus novemcinctus	87.73	0.00e+00	1292.00
IUUC-Dor-030406	Dipodomys ordii	85.61	0.00e+00	1247.00
IUUC-Dse-031312	Dothistroma septosporum	30.91	6.00e-38	152.00
IUUC-Dme-032133	Drosophila melanogaster	42.77	2.00e-73	271.00
IUUC-Ete-032466	Echinops telfairi	84.10	0.00e+00	1209.00
IUUC-Eca-034174	Equus caballus	89.67	0.00e+00	1082.00
IUUC-Eeu-034677	Erinaceus europaeus	91.57	0.00e+00	741.00
IUUC-Fca-035439	Felis catus	89.38	0.00e+00	1274.00
IUUC-Fal-037230	Ficedula albicollis	72.27	0.00e+00	696.00
IUUC-Fox-037976	Fusarium oxysporum	30.50	3.00e-35	143.00
IUUC-Fso-038202	Fusarium solani	28.89	1.00e-34	141.00
IUUC-Gmo-038618	Gadus morhua	70.15	4.00e-77	281.00
IUUC-Ggr-040035	Gaeumannomyces graminis	27.96	3.00e-31	129.00
IUUC-Gga-040908	Gallus gallus	67.55	0.00e+00	760.00
IUUC-Gac-041718	Gasterosteus aculeatus	71.04	5.00e-87	313.00
IUUC-Gma-044229	Glycine max	32.25	2.00e-40	160.00
IUUC-Ggo-044567	Gorilla gorilla	90.13	0.00e+00	1352.00
IUUC-Hsa-046849	Homo sapiens	90.35	0.00e+00	1350.00
IUUC-Hvu-047050	Hordeum vulgare	26.05	7.00e-23	102.00
IUUC-Itr-048832	Ictidomys tridecemlineatus	89.78	0.00e+00	1248.00
IUUC-Kpa-049323	Komagataella pastoris	31.01	1.00e-35	143.00
IUUC-Lch-050524	Latimeria chalumnae	64.49	0.00e+00	727.00
IUUC-Lpe-050947	Leersia perrieri	28.76	2.00e-29	124.00
IUUC-Loc-052709	Lepisosteus oculatus	83.02	3.00e-168	586.00
IUUC-Lma-053186	Leptosphaeria maculans	32.83	3.00e-34	139.00
IUUC-Laf-054472	Loxodonta africana	87.29	0.00e+00	1291.00
IUUC-Mcc-055743	Macaca mulatta	90.35	0.00e+00	1401.00
IUUC-Meu-056399	Macropus eugenii	74.77	0.00e+00	699.00
IUUC-Mor-057073	Magnaporthe oryzae	29.55	7.00e-32	132.00
IUUC-Mpo-057378	Magnaporthe poae	27.66	2.00e-31	130.00
IUUC-Mtr-058761	Medicago truncatula	31.10	1.00e-32	134.00
IUUC-Mla-058840	Melampsora laricipopulina	36.73	9.00e-25	108.00
IUUC-Mga-060129	Meleagris gallopavo	66.16	0.00e+00	837.00
IUUC-Mvi-060424	Microbotryum violaceum	33.55	9.00e-25	108.00
IUUC-Mmr-061295	Microcebus murinus	90.36	0.00e+00	1338.00
IUUC-Mdo-062295	Monodelphis domestica	77.47	0.00e+00	1076.00
IUUC-Mmu-064009	Mus musculus	80.04	0.00e+00	1157.00
IUUC-Mac-065479	Musa acuminata	35.63	3.00e-24	107.00
IUUC-Mpu-065875	Mustela putorius furo	88.73	0.00e+00	1281.00
IUUC-Mlu-066941	Myotis lucifugus	87.54	0.00e+00	1210.00
IUUC-Nfi-068518	Neosartorya fischeri	31.30	2.00e-36	147.00
IUUC-Ncr-068886	Neurospora crassa	28.77	9.00e-32	131.00
IUUC-Nle-069717	Nomascus leucogenys	89.39	0.00e+00	953.00
IUUC-Opr-070280	Ochotona princeps	96.81	0.00e+00	717.00
IUUC-Ont-071462	Oreochromis niloticus	67.02	4.00e-142	499.00
IUUC-Oan-073300	Ornithorhynchus anatinus	75.22	0.00e+00	971.00
IUUC-Oba-075756	Oryza barthii	30.81	1.00e-29	125.00
IUUC-Obr-076809	Oryza brachyantha	27.33	7.00e-20	92.40
IUUC-Ogl-077759	Oryza glaberrima	32.26	1.00e-35	145.00
IUUC-Ogu-078657	Oryza glumaepatula	29.95	1.00e-29	125.00
IUUC-Oin-079481	Oryza indica	32.76	6.00e-31	129.00
IUUC-Olo-081062	Oryza longistaminata	36.31	6.00e-23	102.00
IUUC-Ome-081813	Oryza meridionalis	29.14	8.00e-29	122.00
IUUC-Oni-083007	Oryza nivara	30.81	4.00e-29	123.00
IUUC-Opu-083385	Oryza punctata	29.76	5.00e-29	123.00
IUUC-Oru-084861	Oryza rufipogon	30.81	4.00e-29	123.00
IUUC-Osa-085896	Oryza sativa	32.26	1.00e-35	144.00
IUUC-Ola-086693	Oryzias latipes	63.10	5.00e-128	451.00
IUUC-Olu-087631	Ostreococcus lucimarinus	48.65	1.00e-15	74.30
IUUC-Oga-088262	Otolemur garnettii	91.32	0.00e+00	1335.00
IUUC-Oar-089658	Ovis aries	87.15	0.00e+00	1376.00
IUUC-Ptr-091311	Pan troglodytes	89.91	0.00e+00	1344.00
IUUC-Pan-091925	Papio anubis	90.46	0.00e+00	1404.00
IUUC-Psi-093605	Pelodiscus sinensis	68.70	0.00e+00	839.00
IUUC-Pma-094163	Petromyzon marinus	73.13	3.00e-99	353.00
IUUC-Pno-094790	Phaeosphaeria nodorum	28.27	4.00e-24	105.00
IUUC-Ppa-095943	Physcomitrella patens	30.41	2.00e-44	174.00
IUUC-Pfo-096581	Poecilia formosa	70.50	2.00e-136	480.00
IUUC-Pab-098229	Pongo abelii	90.68	0.00e+00	1361.00
IUUC-Pop-099160	Populus trichocarpa	29.60	4.00e-39	156.00
IUUC-Pca-100875	Procavia capensis	83.74	0.00e+00	860.00
IUUC-Ppe-101658	Prunus persica	36.47	3.00e-17	84.30
IUUC-Pva-102343	Pteropus vampyrus	88.91	0.00e+00	842.00
IUUC-Pgr-103275	Puccinia graminis	36.24	4.00e-18	87.00
IUUC-Ptt-104004	Puccinia triticina	40.00	3.00e-10	60.10
IUUC-Pte-104161	Pyrenophora teres	31.78	7.00e-30	125.00
IUUC-Pyt-104576	Pyrenophora triticirepentis	32.20	3.00e-30	126.00
IUUC-Rno-105264	Rattus norvegicus	77.46	0.00e+00	1089.00
IUUC-Sce-106138	Saccharomyces cerevisiae	30.92	1.00e-37	150.00
IUUC-Sha-107497	Sarcophilus harrisii	77.21	0.00e+00	1100.00
IUUC-Sja-107991	Schizosaccharomyces japonicus	33.13	4.00e-44	172.00
IUUC-Spo-108257	Schizosaccharomyces pombe	33.93	2.00e-46	180.00
IUUC-Ssl-108581	Sclerotinia sclerotiorum	30.03	5.00e-38	152.00
IUUC-Smo-109358	Selaginella moellendorffii	29.76	3.00e-33	135.00
IUUC-Sit-109920	Setaria italica	30.19	1.00e-36	148.00
IUUC-Sly-111616	Solanum lycopersicum	38.10	1.00e-26	115.00
IUUC-Stu-112648	Solanum tuberosum	32.37	3.00e-11	63.20
IUUC-Sar-113120	Sorex araneus	81.50	0.00e+00	1136.00
IUUC-Sbi-113881	Sorghum bicolor	30.46	9.00e-38	152.00
IUUC-Sre-115127	Sporisorium reilianum	30.96	4.00e-47	182.00
IUUC-Ssc-116147	Sus scrofa	87.43	0.00e+00	1293.00
IUUC-Tgu-117215	Taeniopygia guttata	71.60	6.00e-170	592.00
IUUC-Tru-118525	Takifugu rubripes	64.27	9.00e-135	473.00
IUUC-Tsy-119160	Tarsius syrichta	90.03	0.00e+00	1348.00
IUUC-Tni-119816	Tetraodon nigroviridis	68.84	2.00e-83	301.00
IUUC-Tca-121727	Theobroma cacao	37.50	8.00e-18	85.90
IUUC-Tre-122181	Trichoderma reesei	29.54	9.00e-36	145.00
IUUC-Tvi-122316	Trichoderma virens	28.27	2.00e-35	144.00
IUUC-Tae-125227	Triticum aestivum	36.31	2.00e-17	84.70
IUUC-Tur-126827	Triticum urartu	36.31	2.00e-16	81.30
IUUC-Tme-126984	Tuber melanosporum	31.52	1.00e-44	174.00
IUUC-Tbe-127263	Tupaia belangeri	87.93	0.00e+00	1032.00
IUUC-Ttr-128498	Tursiops truncatus	86.91	0.00e+00	1349.00
IUUC-Uma-129457	Ustilago maydis	30.13	8.00e-44	171.00
IUUC-Vda-129986	Verticillium dahliae	28.86	5.00e-35	142.00
IUUC-Vpa-130795	Vicugna pacos	85.83	0.00e+00	678.00
IUUC-Vvi-131146	Vitis vinifera	35.88	6.00e-17	82.80
IUUC-Xtr-132789	Xenopus tropicalis	63.57	0.00e+00	676.00
IUUC-Xma-133011	Xiphophorus maculatus	69.79	6.00e-135	474.00
IUUC-Yli-134516	Yarrowia lipolytica	33.05	5.00e-40	158.00
IUUC-Zma-134699	Zea mays	30.38	4.00e-36	146.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence