iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sja-107780

Ensembl Protein ID

EEB09628

UniProt Accession

B6K7X4; B6K7X4_SCHJY

Genbank Protein ID

EEB09628.1

Protein Name

tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit TRM82; Transfer RNA methyltransferase 82

Genbank Nucleotide ID

KE651167

Gene Name

TRM82; SJAG_04848

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
SJAG_04848	EEB09628	EEB09628

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	7.60e-09	33.7	231	267

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sdtllvsGsdDgtikvWDlrtgvll 36
           gH+d v+ +++ ++++l+sG++D+ + +WDl+t ++l
   Q: 231  GHEDFVSRICLvDNDMLASGGGDNHVFLWDLSTYKCL 267
           899*******9766*****************987776 PP

Organism

Schizosaccharomyces japonicus

Functional Description
(View)

Required for the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. In the complex, it is required to stabilize and induce conformational changes of the catalytic subunit.

Protein Sequence
(Fasta)

MSSATFRHPC QTVLWNKFSD SIVCCSGPFL KEFACSTGEK LNEYSYEDKL DQKHREAAAY 60
GQAVRFVAYS KDGSFMVTVN EDKTLCLWNV INSKIQLVKL IKVAKRCSAL ECSENGDIVY 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AACAGTAGAT CTCTAACAGA GAGAAAAAAC ACAACTTAAC ATTACCCTCA ATGTCGTCTG 60
CTACTTTCCG TCACCCATGC CAAACTGTAC TGTGGAATAA GTTTAGCGAC TCTATTGTTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0489--Methyltransferase
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0677--Repeat
KW-0808--Transferase
KW-0819--tRNA processing
KW-0853--WD repeat

Interpro

IPR028884--Trm82
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005829--C:cytosol
GO:0005634--C:nucleus
GO:0008168--F:methyltransferase activity
GO:0036265--P:RNA (guanine-N7)-methylation
GO:0030488--P:tRNA methylation

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000556	Aegilops tauschii	23.30	2.00e-11	61.60
IUUC-Atr-002431	Amborella trichopoda	44.78	1.00e-06	43.90
IUUC-Apl-003975	Anas platyrhynchos	29.23	2.00e-13	68.20
IUUC-Aca-005170	Anolis carolinensis	41.56	8.00e-11	59.30
IUUC-Aly-005769	Arabidopsis lyrata	24.84	3.00e-16	77.40
IUUC-Ath-006733	Arabidopsis thaliana	25.37	9.00e-16	75.90
IUUC-Acl-008151	Aspergillus clavatus	28.75	8.00e-24	102.00
IUUC-Afl-008518	Aspergillus flavus	33.33	8.00e-21	92.40
IUUC-Afu-009102	Aspergillus fumigatus	32.76	3.00e-23	100.00
IUUC-Ani-009442	Aspergillus nidulans	28.62	9.00e-20	89.40
IUUC-Aor-010133	Aspergillus oryzae	30.77	4.00e-21	94.00
IUUC-Ate-010465	Aspergillus terreus	26.02	2.00e-18	84.70
IUUC-Ame-010613	Astyanax mexicanus	29.95	3.00e-14	70.50
IUUC-Bgr-012067	Blumeria graminis	32.47	7.00e-27	113.00
IUUC-Bta-012788	Bos taurus	29.23	4.00e-15	73.60
IUUC-Bdi-014458	Brachypodium distachyon	26.88	1.00e-11	62.00
IUUC-Bol-016398	Brassica oleracea	25.16	3.00e-18	84.30
IUUC-Bra-017059	Brassica rapa	27.00	2.00e-17	81.30
IUUC-Cpo-021963	Cavia porcellus	27.49	1.00e-13	68.60
IUUC-Csa-024148	Chlorocebus sabaeus	29.44	3.00e-13	67.40
IUUC-Cne-026834	Cryptococcus neoformans	30.77	3.00e-25	108.00
IUUC-Dre-028427	Danio rerio	25.66	7.00e-17	79.70
IUUC-Dor-030522	Dipodomys ordii	26.42	3.00e-13	67.40
IUUC-Dme-032136	Drosophila melanogaster	37.50	6.00e-13	66.60
IUUC-Fca-035833	Felis catus	28.02	2.00e-13	68.20
IUUC-Fal-037497	Ficedula albicollis	26.27	3.00e-13	67.40
IUUC-Gga-040547	Gallus gallus	30.15	5.00e-14	70.10
IUUC-Gac-041761	Gasterosteus aculeatus	26.64	7.00e-13	66.20
IUUC-Ggo-045340	Gorilla gorilla	29.91	4.00e-12	63.50
IUUC-Hsa-046403	Homo sapiens	29.58	1.00e-12	65.50
IUUC-Hvu-047643	Hordeum vulgare	23.42	7.00e-15	73.20
IUUC-Itr-048103	Ictidomys tridecemlineatus	25.71	5.00e-14	70.10
IUUC-Kpa-049283	Komagataella pastoris	27.59	6.00e-21	92.80
IUUC-Lch-050682	Latimeria chalumnae	27.97	9.00e-16	75.90
IUUC-Lpe-050712	Leersia perrieri	28.51	4.00e-15	73.90
IUUC-Loc-052599	Lepisosteus oculatus	27.78	5.00e-14	70.10
IUUC-Laf-054390	Loxodonta africana	25.62	6.00e-14	69.70
IUUC-Mcc-054747	Macaca mulatta	29.44	4.00e-13	67.00
IUUC-Mtr-058600	Medicago truncatula	27.82	1.00e-15	75.90
IUUC-Mla-059135	Melampsora laricipopulina	27.72	6.00e-23	100.00
IUUC-Mga-059876	Meleagris gallopavo	30.15	3.00e-14	70.50
IUUC-Mvi-060359	Microbotryum violaceum	30.15	1.00e-21	96.30
IUUC-Mmr-061518	Microcebus murinus	26.84	1.00e-13	68.90
IUUC-Mac-065417	Musa acuminata	28.92	2.00e-18	85.10
IUUC-Nfi-068402	Neosartorya fischeri	32.33	1.00e-22	99.40
IUUC-Nle-069914	Nomascus leucogenys	45.31	1.00e-09	55.50
IUUC-Ont-071555	Oreochromis niloticus	27.31	9.00e-15	72.40
IUUC-Oan-072951	Ornithorhynchus anatinus	29.65	9.00e-16	75.90
IUUC-Ocu-074679	Oryctolagus cuniculus	26.55	5.00e-11	60.10
IUUC-Obr-076769	Oryza brachyantha	26.42	5.00e-16	76.60
IUUC-Ogl-077168	Oryza glaberrima	26.91	2.00e-16	78.20
IUUC-Oin-079207	Oryza indica	26.91	2.00e-16	78.20
IUUC-Opu-084031	Oryza punctata	26.71	2.00e-17	81.60
IUUC-Osa-085327	Oryza sativa	27.57	9.00e-17	79.30
IUUC-Ola-086716	Oryzias latipes	27.56	1.00e-15	75.10
IUUC-Olu-087708	Ostreococcus lucimarinus	22.81	1.00e-08	52.40
IUUC-Oar-090239	Ovis aries	28.63	1.00e-15	75.10
IUUC-Ptr-090851	Pan troglodytes	29.58	3.00e-12	64.30
IUUC-Pan-092558	Papio anubis	29.44	2.00e-13	67.80
IUUC-Psi-093792	Pelodiscus sinensis	26.79	2.00e-13	68.20
IUUC-Ppa-095757	Physcomitrella patens	28.05	4.00e-12	63.50
IUUC-Pfo-096465	Poecilia formosa	26.61	6.00e-14	69.70
IUUC-Pab-097722	Pongo abelii	29.11	2.00e-12	64.70
IUUC-Pop-098979	Populus trichocarpa	24.39	6.00e-15	73.20
IUUC-Pca-100753	Procavia capensis	40.74	1.00e-11	62.00
IUUC-Ppe-101515	Prunus persica	25.27	1.00e-14	72.40
IUUC-Spo-108251	Schizosaccharomyces pombe	43.81	3.00e-97	346.00
IUUC-Smo-108691	Selaginella moellendorffii	29.39	7.00e-19	86.30
IUUC-Sit-110020	Setaria italica	26.03	1.00e-17	82.40
IUUC-Sly-111543	Solanum lycopersicum	24.12	5.00e-20	90.10
IUUC-Stu-111925	Solanum tuberosum	24.66	1.00e-19	88.60
IUUC-Sbi-114061	Sorghum bicolor	27.38	9.00e-19	85.90
IUUC-Tgu-117321	Taeniopygia guttata	25.85	8.00e-10	55.80
IUUC-Tru-118454	Takifugu rubripes	27.09	2.00e-13	68.20
IUUC-Tni-119894	Tetraodon nigroviridis	26.72	2.00e-13	67.80
IUUC-Tca-121746	Theobroma cacao	26.37	3.00e-18	84.00
IUUC-Tae-124114	Triticum aestivum	25.14	8.00e-16	75.90
IUUC-Tur-126254	Triticum urartu	23.81	2.00e-11	61.20
IUUC-Tbe-127683	Tupaia belangeri	43.66	2.00e-10	58.20
IUUC-Ttr-129056	Tursiops truncatus	28.87	3.00e-13	67.80
IUUC-Vvi-131428	Vitis vinifera	24.93	1.00e-16	79.00
IUUC-Xma-133605	Xiphophorus maculatus	26.20	1.00e-11	62.40

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence