iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Bdi-014181

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

CM000884

Gene Name

BRADI_5g07120

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
BRADI5G07120	BRADI5G07120.1	BRADI5G07120.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	4.80e-18	65.5	324	396

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceenss 74
           vp++flCp+s+++M++Pvv+ sG t+d s++e+w ++ ++ cPvt++ l+++  +P   +   i+ w+ en++
   Q: 324  VPDFFLCPVSKKVMENPVVITSGKTVDHSALEEWWNTHKHICPVTGEVLKHSISIPDVLIALCISWWRTENGI 396
           8******************************************************************999986 PP

Organism

Brachypodium distachyon

Protein Sequence
(Fasta)

MDGGGRDTGG RDWSEEGIDE VKELGLRRRS RTASSSPPPL DPAPARILAS RRQPPPPGPR 60
PSGVPLPPRL QPLTFSEDAA AGSSREYRQG DFAWVAETVS RLKEKGVIAS SSSDGSKGSA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGACGGGG GCGGCCGCGA TACCGGCGGC CGCGACTGGT CAGAGGAGGG GATCGACGAG 60
GTGAAGGAGC TTGGCCTGCG GAGGCGGAGC CGGACGGCGA GCTCGTCGCC TCCTCCGCTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00504--Ubox

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005634--C:nucleus
GO:0004842--F:ubiquitin-protein transferase activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001015	Aegilops tauschii	66.58	2.00e-132	465.00
IUUC-Hvu-047192	Hordeum vulgare	67.43	0.00e+00	671.00
IUUC-Lpe-051723	Leersia perrieri	60.19	5.00e-154	537.00
IUUC-Oba-075695	Oryza barthii	59.75	5.00e-166	577.00
IUUC-Obr-076271	Oryza brachyantha	59.64	3.00e-152	530.00
IUUC-Ogl-077902	Oryza glaberrima	59.57	1.00e-170	592.00
IUUC-Ogu-078226	Oryza glumaepatula	59.93	3.00e-166	577.00
IUUC-Oin-079808	Oryza indica	63.25	3.00e-160	558.00
IUUC-Olo-080703	Oryza longistaminata	60.00	7.00e-119	419.00
IUUC-Ome-081157	Oryza meridionalis	58.68	3.00e-168	584.00
IUUC-Oni-082070	Oryza nivara	59.75	3.00e-165	574.00
IUUC-Opu-083808	Oryza punctata	61.17	4.00e-163	567.00
IUUC-Oru-085024	Oryza rufipogon	59.75	3.00e-165	574.00
IUUC-Sit-109991	Setaria italica	56.77	7.00e-149	520.00
IUUC-Sbi-114496	Sorghum bicolor	50.35	7.00e-142	496.00
IUUC-Tae-123003	Triticum aestivum	67.02	0.00e+00	711.00
IUUC-Tur-126074	Triticum urartu	65.62	0.00e+00	627.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence