iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114736

UUCD1 version

UUC-SoB-01089

Ensembl Protein ID

Sb06g016295.1

UniProt Accession

C5YGB5; C5YGB4; C5YGB5_SORBI

Genbank Protein ID

EES10782.2; EES12144.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000765; CM000765

Gene Name

SORBI_006G075600

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb06g016295	Sb06g016295.1	Sb06g016295.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.30e-27	95.5	380	413

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf...sdtllvsGsdDgtikvWDlrt 32
           H+d vtc++f   ++++++sGs Dg++++WD+ +
   Q: 380  HKDYVTCVQFnpiDEKYFISGSLDGKVRIWDVLD 413
           ***********9777****************866 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MPRSESDSDD VFFDAFEDVR SPGEPSCSED CSTSHEVSPV PMKFEYEIWA NEPMSVQERR 60
QRFLKGMGFD DFLSARTDSF QCHGEITAVE SSTDMEERSV SVHSSLDSSV CDNESEFDGA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AAAACAAGCA ACCAAACGCG CCTCTCTGTG TCTCTGCTCT GCCTTGGAAA CCAAGACCAG 60
AGACCGGAGC AAACGAGGGC GGCCAGCCGG ACTCCGGAGC GGAGGAAAGC GTCCAATCCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

KEGG

sbi:SORBI_06g016290; sbi:SORBI_06g016295

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001059	Aegilops tauschii	67.22	0.00e+00	870.00
IUUC-Bdi-014701	Brachypodium distachyon	69.88	0.00e+00	879.00
IUUC-Gma-043677	Glycine max	39.94	2.00e-124	438.00
IUUC-Hvu-047751	Hordeum vulgare	68.42	0.00e+00	890.00
IUUC-Lpe-051471	Leersia perrieri	67.27	0.00e+00	840.00
IUUC-Mtr-057957	Medicago truncatula	39.73	2.00e-110	392.00
IUUC-Mac-064487	Musa acuminata	45.55	1.00e-151	528.00
IUUC-Oba-075261	Oryza barthii	66.18	0.00e+00	803.00
IUUC-Obr-076501	Oryza brachyantha	67.01	0.00e+00	837.00
IUUC-Ogl-077292	Oryza glaberrima	66.18	0.00e+00	803.00
IUUC-Ogu-079011	Oryza glumaepatula	66.33	0.00e+00	806.00
IUUC-Oin-079603	Oryza indica	66.18	0.00e+00	805.00
IUUC-Olo-080221	Oryza longistaminata	66.76	0.00e+00	822.00
IUUC-Ome-081846	Oryza meridionalis	64.24	0.00e+00	768.00
IUUC-Oni-082883	Oryza nivara	66.18	0.00e+00	805.00
IUUC-Opu-083467	Oryza punctata	66.21	0.00e+00	820.00
IUUC-Oru-084692	Oryza rufipogon	66.33	0.00e+00	805.00
IUUC-Osa-085979	Oryza sativa	66.18	0.00e+00	803.00
IUUC-Pop-099696	Populus trichocarpa	41.88	8.00e-130	456.00
IUUC-Ppe-101967	Prunus persica	38.41	5.00e-123	434.00
IUUC-Sit-110631	Setaria italica	85.25	0.00e+00	1143.00
IUUC-Tca-121743	Theobroma cacao	39.91	2.00e-119	422.00
IUUC-Tae-124073	Triticum aestivum	68.22	0.00e+00	879.00
IUUC-Tur-126370	Triticum urartu	67.83	0.00e+00	790.00
IUUC-Vvi-131098	Vitis vinifera	39.75	4.00e-116	411.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence