iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Stu-112404

Ensembl Protein ID

PGSC0003DMT400051772

UniProt Accession

M1BS70; M1BS70_SOLTU

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PGSC0003DMG400020093	PGSC0003DMT400051772	PGSC0003DMT400051772

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.30e-25	87.9	664	701
UBD/Beta-Prp	5.60e-42	145.2	630	775

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sdtllvsGsdDgtikvWDlrtgvllk 37
           gHt+ v+ l++  +++ll+s s   ++kvW+l tg++++
   Q: 664  GHTGVVNYLCWdlNGDLLASVSEE-SVKVWSLNTGDCIH 701
           8***********7669******76.9***********97 PP

UBD/Beta-Prp

   S: 100  lsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsf 188
           ++f+p +  l+++ +d+++ ++d+e++  l+  ++gh+gvvn+++++ +g+ll+s s  + v++W+l+tg+++++l++ + ++ +s  f
   Q: 630  VRFQPITGQLLAAASDKVVSIFDVENDRQLQ-SFQGHTGVVNYLCWDLNGDLLASVSE-ESVKVWSLNTGDCIHELSS-NGNQFHSCVF 715
           789997777777888****************.**********************9996.68****************9.********** PP
   S: 189  dsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsiriW 249
           +++   l+ ++  ++++lw++ +++  +t  +h++ v  ++ sp +  ++s+s+D s+++W
   Q: 716  HPSYSALLVIGGMRSLELWNMVENK-SMTIPAHENIVAALAQSPVTGMVASASHDSSVKLW 775
           *********************9886.99********************************* PP

Organism

Solanum tuberosum

Protein Sequence
(Fasta)

MAQSNWEADK MLDVYIHDYL LKRKLHNSAK AFMTEGKVAT DPVAIDAPGG FLFEWWSVFW 60
DIFIARTNEK HSEAAAAYIE TQQMKAREHQ QQLQMQQLQL MQQRNAQLQR RDQNPSLGGP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTTCCTTTCG TTGAAGCTCT TCTTCTTCCT TGTGAAGAGA ATCTTTTACA AGCTTATGAA 60
TGGTGAATTT TAGAGAAAAA AGTGTTGAAT TGCTTATGAT AAGTATCTAA GTTTATGTTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR006594--LisH
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50896--LISH
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08513--LisH
PF00400--WD40

SMART

SM00667--LisH
SM00320--WD40

KEGG

sot:102600272

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000776	Aegilops tauschii	62.81	3.00e-143	501.00
IUUC-Aly-006471	Arabidopsis lyrata	63.07	0.00e+00	877.00
IUUC-Ath-007671	Arabidopsis thaliana	61.84	0.00e+00	868.00
IUUC-Bdi-014855	Brachypodium distachyon	63.37	0.00e+00	897.00
IUUC-Bol-016419	Brassica oleracea	61.51	0.00e+00	891.00
IUUC-Bra-017537	Brassica rapa	60.03	0.00e+00	861.00
IUUC-Gma-044268	Glycine max	67.98	0.00e+00	946.00
IUUC-Hvu-047358	Hordeum vulgare	64.10	4.00e-153	533.00
IUUC-Lpe-051527	Leersia perrieri	63.88	0.00e+00	886.00
IUUC-Mtr-058727	Medicago truncatula	72.07	0.00e+00	996.00
IUUC-Mac-064608	Musa acuminata	64.67	0.00e+00	884.00
IUUC-Oba-075243	Oryza barthii	62.25	0.00e+00	867.00
IUUC-Obr-076847	Oryza brachyantha	62.95	0.00e+00	861.00
IUUC-Ogl-076931	Oryza glaberrima	63.54	0.00e+00	927.00
IUUC-Ogu-077963	Oryza glumaepatula	62.21	0.00e+00	862.00
IUUC-Oin-079144	Oryza indica	63.54	0.00e+00	926.00
IUUC-Olo-080947	Oryza longistaminata	60.30	0.00e+00	819.00
IUUC-Ome-081723	Oryza meridionalis	61.52	0.00e+00	857.00
IUUC-Oni-083067	Oryza nivara	63.41	0.00e+00	918.00
IUUC-Opu-083429	Oryza punctata	63.70	0.00e+00	926.00
IUUC-Oru-084534	Oryza rufipogon	62.59	0.00e+00	863.00
IUUC-Osa-085788	Oryza sativa	63.54	0.00e+00	925.00
IUUC-Ppa-095985	Physcomitrella patens	59.47	2.00e-137	481.00
IUUC-Pop-099999	Populus trichocarpa	74.36	0.00e+00	1074.00
IUUC-Ppe-101584	Prunus persica	76.12	0.00e+00	1085.00
IUUC-Smo-108724	Selaginella moellendorffii	63.61	3.00e-145	508.00
IUUC-Sit-110618	Setaria italica	63.13	0.00e+00	895.00
IUUC-Sly-111127	Solanum lycopersicum	96.27	0.00e+00	1394.00
IUUC-Sbi-114046	Sorghum bicolor	63.83	0.00e+00	910.00
IUUC-Tca-121725	Theobroma cacao	73.04	0.00e+00	1025.00
IUUC-Tae-125446	Triticum aestivum	62.79	0.00e+00	897.00
IUUC-Tur-126636	Triticum urartu	59.21	0.00e+00	785.00
IUUC-Vvi-130936	Vitis vinifera	78.17	0.00e+00	1140.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence