iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Stu-112052

Ensembl Protein ID

PGSC0003DMT400050410

UniProt Accession

M1BQ90; M1BQ90_SOLTU

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PGSC0003DMG400019595	PGSC0003DMT400050409	PGSC0003DMT400050409
PGSC0003DMG400019595	PGSC0003DMT400050410	PGSC0003DMT400050410

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.50e-25	89.4	393	427

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf...sdtllvsGsdDgtikvWDlrtg 33
           H++ vtc++f   +d++++sGs Dg++++W + +g
   Q: 393  HSNYVTCIQFnpvNDDYFISGSIDGKVRIWAINSG 427
           99**********999***************97766 PP

Organism

Solanum tuberosum

Protein Sequence
(Fasta)

MGSISDDEEC VFFDASENIG QVPDLGSIEP QVLKSSSRID NCVTSSYQYD VWSRSPSSVR 60
ERRREFFSWM GEDPVDVYGS SDSSCEIERI MESSEAVVRT SILEDEFPSR QVPLPGLSVG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGTTTATGAG AGTTGTTGTA AGAGAGTCCT GCAATGTGGG CAAAATAGGG TGGCGCACAA 60
AGGAAGAACC AAACAAGACT ACACATCCAT ACTTACCTTT ACTCGTTTCT CGCTCCATCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ath-007681	Arabidopsis thaliana	46.10	8.00e-155	539.00
IUUC-Bra-017674	Brassica rapa	45.04	1.00e-142	499.00
IUUC-Mtr-057948	Medicago truncatula	52.48	0.00e+00	639.00
IUUC-Obr-076155	Oryza brachyantha	46.51	1.00e-138	486.00
IUUC-Sly-111558	Solanum lycopersicum	96.15	0.00e+00	1290.00
IUUC-Sre-114996	Sporisorium reilianum	30.09	9.00e-41	160.00
IUUC-Tme-126882	Tuber melanosporum	31.90	4.00e-58	218.00
IUUC-Uma-129369	Ustilago maydis	35.32	3.00e-39	155.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence