iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sly-111858

Ensembl Protein ID

Solyc01g088630.1.1

UniProt Accession

K4AYQ3; K4AYQ3_SOLLC

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Solyc01g088630.1	Solyc01g088630.1.1	Solyc01g088630.1.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.40e-08	35.8	147	189

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+Cl+ f  +d++++lp C H+fh  C+ +w        ++++CPlCr
   Q: 147  CAVCLSKFepEDQLRLLPlCLHAFHSGCIDAW------LVTNQTCPLCR 189
           ******9988777*******************......**********8 PP

Organism

Solanum lycopersicum

Protein Sequence
(Fasta)

MSAFFPQSPP LPMPFTATVN GGDVPNTAID NTALINDQTP SPSSSSSSSA TSSSFVIVVI 60
VIASAIIVSA SIYLILRLLS RRFHRSFRTY ATADDVVSHS SSSATAAAAV TGNRLENQRS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTCCGCCT TCTTTCCTCA GTCTCCCCCA CTCCCAATGC CTTTCACCGC CACCGTCAAC 60
GGCGGAGATG TTCCCAACAC CGCCATTGAT AACACTGCCC TTATCAACGA TCAAACTCCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

sly:101245506

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005918	Arabidopsis lyrata	44.44	2.00e-44	172.00
IUUC-Ath-007239	Arabidopsis thaliana	46.07	1.00e-45	176.00
IUUC-Bdi-014533	Brachypodium distachyon	43.50	3.00e-29	122.00
IUUC-Bol-015819	Brassica oleracea	46.84	3.00e-45	174.00
IUUC-Bra-017550	Brassica rapa	44.57	2.00e-43	169.00
IUUC-Cel-018152	Caenorhabditis elegans	38.30	6.00e-16	76.30
IUUC-Gma-043797	Glycine max	43.28	5.00e-35	140.00
IUUC-Hvu-047273	Hordeum vulgare	41.38	2.00e-29	122.00
IUUC-Lpe-051366	Leersia perrieri	42.59	5.00e-26	110.00
IUUC-Mtr-058394	Medicago truncatula	42.41	2.00e-42	165.00
IUUC-Mvi-060267	Microbotryum violaceum	37.50	3.00e-12	67.00
IUUC-Mac-065570	Musa acuminata	48.31	3.00e-22	98.60
IUUC-Obr-076640	Oryza brachyantha	40.40	5.00e-23	101.00
IUUC-Ogl-077705	Oryza glaberrima	39.29	6.00e-25	107.00
IUUC-Ogu-078864	Oryza glumaepatula	38.86	8.00e-25	107.00
IUUC-Oin-079511	Oryza indica	39.29	4.00e-25	107.00
IUUC-Ome-081312	Oryza meridionalis	41.21	9.00e-25	107.00
IUUC-Oni-082796	Oryza nivara	39.29	6.00e-25	107.00
IUUC-Opu-083307	Oryza punctata	42.79	5.00e-25	107.00
IUUC-Oru-084702	Oryza rufipogon	39.29	6.00e-25	107.00
IUUC-Osa-085669	Oryza sativa	40.29	4.00e-26	111.00
IUUC-Pop-100094	Populus trichocarpa	40.49	7.00e-37	147.00
IUUC-Ppe-101209	Prunus persica	42.59	7.00e-43	166.00
IUUC-Sit-110129	Setaria italica	42.55	1.00e-21	96.70
IUUC-Stu-112105	Solanum tuberosum	96.46	7.00e-113	399.00
IUUC-Sbi-114578	Sorghum bicolor	42.86	2.00e-20	92.40
IUUC-Tca-120922	Theobroma cacao	44.88	8.00e-44	169.00
IUUC-Tae-123614	Triticum aestivum	40.09	4.00e-29	121.00
IUUC-Vvi-130862	Vitis vinifera	59.00	5.00e-30	123.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence