iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mac-064665

Ensembl Protein ID

GSMUA_Achr3P18060_001

UniProt Accession

M0SFM2; M0SFM2_MUSAM

Protein Name

RING-type E3 ubiquitin transferase

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
GSMUA_Achr3G18060_001	GSMUA_Achr3T18060_001	GSMUA_Achr3P18060_001

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	5.30e-29	101.0	4	74

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 3    peeflCpIslelMrdPvvlpsGitydrssIekwlasggk.tcPvtrqplteedlvPnltlrrliqawceen 72
           p  f CpIslelM+dPv++++G+ty+r++Iekwl +++k tcP t+q+l++ dl+Pn+t++rli++++e  
   Q: 4    PFLFQCPISLELMEDPVTIATGVTYERKNIEKWLFTYKKlTCPATMQRLESFDLTPNHTVKRLISSFLEHA 74
           667****************************************************************9875 PP

Organism

Musa acuminata

Protein Sequence
(Fasta)

MEAPFLFQCP ISLELMEDPV TIATGVTYER KNIEKWLFTY KKLTCPATMQ RLESFDLTPN 60
HTVKRLISSF LEHAADEEPV TSPPCSYDAV DHDKLVSLLK SIQTGPFKAS GLRKLKVLVE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGAAGCTC CATTCTTGTT CCAGTGCCCC ATTTCGCTGG AGCTAATGGA GGACCCGGTG 60
ACAATCGCTA CCGGCGTCAC GTACGAGAGG AAGAACATCG AGAAATGGCT GTTCACATAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002928	Amborella trichopoda	50.49	9.00e-114	402.00
IUUC-Bdi-014881	Brachypodium distachyon	50.00	2.00e-42	166.00
IUUC-Hvu-047092	Hordeum vulgare	47.64	2.00e-50	192.00
IUUC-Lpe-051020	Leersia perrieri	44.86	2.00e-84	305.00
IUUC-Oba-075501	Oryza barthii	42.89	7.00e-73	266.00
IUUC-Obr-076700	Oryza brachyantha	48.18	6.00e-79	286.00
IUUC-Ogl-077950	Oryza glaberrima	50.84	3.00e-94	338.00
IUUC-Ogu-078575	Oryza glumaepatula	50.36	2.00e-93	335.00
IUUC-Oin-079500	Oryza indica	50.12	5.00e-93	333.00
IUUC-Ome-081267	Oryza meridionalis	45.63	7.00e-78	283.00
IUUC-Oni-082805	Oryza nivara	50.12	5.00e-93	333.00
IUUC-Opu-083721	Oryza punctata	49.76	1.00e-92	332.00
IUUC-Oru-084349	Oryza rufipogon	50.36	6.00e-93	333.00
IUUC-Osa-086298	Oryza sativa	50.36	8.00e-93	333.00
IUUC-Ppe-101339	Prunus persica	48.78	1.00e-97	348.00
IUUC-Sit-110629	Setaria italica	47.94	2.00e-82	298.00
IUUC-Sly-111695	Solanum lycopersicum	47.06	1.00e-97	348.00
IUUC-Stu-112376	Solanum tuberosum	46.83	2.00e-98	351.00
IUUC-Sbi-114088	Sorghum bicolor	50.00	7.00e-89	320.00
IUUC-Tae-124754	Triticum aestivum	47.18	2.00e-51	196.00
IUUC-Tur-126771	Triticum urartu	42.20	4.00e-63	234.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence