iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Obr-076090

Ensembl Protein ID

OB06G19830.1

UniProt Accession

J3MD89; J3MD89_ORYBR

Protein Name

RING-type E3 ubiquitin transferase

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
OB06G19830	OB06G19830.1	OB06G19830.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	3.60e-19	69.3	213	290

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggk.....tcPvtrqplteedlvPnltlrrliqawceenss 74
           +++ f Cp+++++M dPv+++sG+t+dr++Ie+++++         cPvt+ ++++++l  n  l+++i +w+ +n+s
   Q: 213  LYDSFFCPLTNKVMVDPVTTESGVTFDRKAIEEYFEKFTDgsepvICPVTKMSMQSKTLRSNVPLKSTIAEWIMRNES 290
           5799*******************************7766666899****************************99875 PP

Organism

Oryza brachyantha

Protein Sequence
(Fasta)

MAVRSGAQAR KASLVESIQA AISELMPPEA AADAEQENFM DVGSHLYHAP LATMDLQRAQ 60
NSTIHAMEYL AANVDLAKDL IMRCSTVARK LKNDDLLSMT EDLDSVIKNI GHELSRIPAS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCGGTGG TAGGTTTTCC ACTTCGGTTA GATGGAGCGG AGAAAAGATG GTGATTCCGG 60
GTAGGATGTG CAATCGAGCT GTTCTTGGTG TCCTTCCCCA CCTTGTGTTC TTGGTGTTTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bdi-014572	Brachypodium distachyon	81.38	0.00e+00	1234.00
IUUC-Hvu-047800	Hordeum vulgare	79.12	0.00e+00	1253.00
IUUC-Lpe-050817	Leersia perrieri	93.46	0.00e+00	1519.00
IUUC-Oba-075004	Oryza barthii	93.79	0.00e+00	1550.00
IUUC-Ogl-077375	Oryza glaberrima	93.79	0.00e+00	1550.00
IUUC-Ogu-078488	Oryza glumaepatula	94.15	0.00e+00	1555.00
IUUC-Oin-079369	Oryza indica	94.85	0.00e+00	1414.00
IUUC-Olo-080901	Oryza longistaminata	94.52	0.00e+00	1568.00
IUUC-Ome-081243	Oryza meridionalis	93.91	0.00e+00	1553.00
IUUC-Oni-082268	Oryza nivara	93.79	0.00e+00	1551.00
IUUC-Opu-083388	Oryza punctata	94.75	0.00e+00	1563.00
IUUC-Oru-084387	Oryza rufipogon	93.79	0.00e+00	1550.00
IUUC-Osa-086255	Oryza sativa	94.04	0.00e+00	1462.00
IUUC-Sit-110322	Setaria italica	82.12	0.00e+00	1280.00
IUUC-Sbi-113818	Sorghum bicolor	79.56	0.00e+00	1189.00
IUUC-Tae-123677	Triticum aestivum	78.88	0.00e+00	1228.00
IUUC-Tur-126161	Triticum urartu	79.06	0.00e+00	1209.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence