iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Bdi-014942

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000882

Gene Name

LOC100827485; BRADI_3g19160

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
BRADI3G19160	BRADI3G19160.1	BRADI3G19160.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	7.10e-08	33.4	141	183

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           C++Cle+    + ++ lp CgHvfh +C+ +w         + +CP Cr
   Q: 141  CPVCLEEVrgGEMVRQLPaCGHVFHVECIDMW------LHSHRTCPMCR 183
           ******995533399999**************......99********8 PP

Organism

Brachypodium distachyon

Protein Sequence
(Fasta)

MLNLYPRLSV AAAANEDHYA AEDYDDDDDV GRSHRNRALY GIGVVCVSIF LFCVLAAAVS 60
VLKALAFAGT VALLLLVLGC LAPRTTWVLR PPPRRRPANA VLALTARGGC ACAPANVPPA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCTGAACC TGTACCCGAG GCTCTCGGTG GCGGCCGCCG CGAACGAGGA CCACTACGCC 60
GCCGAGGACT ACGACGACGA TGACGACGTG GGCAGGTCAC ACCGCAACCG CGCCTTGTAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

bdi:100827485

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Lpe-050751	Leersia perrieri	63.74	1.00e-24	104.00
IUUC-Obr-076258	Oryza brachyantha	50.63	5.00e-17	79.30
IUUC-Oin-079732	Oryza indica	46.11	1.00e-25	108.00
IUUC-Oni-082864	Oryza nivara	42.79	8.00e-26	109.00
IUUC-Sbi-114247	Sorghum bicolor	43.43	4.00e-29	120.00
IUUC-Tae-124018	Triticum aestivum	53.48	9.00e-40	155.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence