iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sly-110980

Ensembl Protein ID

Solyc01g102510.2.1

UniProt Accession

K4B1H9; K4B1H9_SOLLC

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Solyc01g102510.2	Solyc01g102510.2.1	Solyc01g102510.2.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.70e-08	35.2	210	243

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtcla.f...sd.tllvsGsdDgtikvWD 29
           gH++ ++cl  f   s+  llvsG+ Dg + +W+
   Q: 210  GHKGAISCLMnFmaaSGeSLLVSGGSDGLLVLWS 243
           8*******855****7789**************8 PP

Organism

Solanum lycopersicum

Protein Sequence
(Fasta)

MLRLRAFRPT NDKIVKIQMH PTHPWLVTAD ASDHVSVWNW EHRQIIYELK PGGVDERRLV 60
GAKLEKLAEG ESEPRGKPTE AIRGGSVKQV SFYDDDVRFW QLWRNQSAAA ESPAAAGHVT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATTTTCACTG AACCGGCTAA ACACTCCAAC AACCACCAGC ACTCGCCGGA AAAGATCTAT 60
CAATATAGTC AGATCCATCT CTTTGTTGCT TGCATTTTGC CGGAATAGTT GAAAATATGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

SMART

SM00320--WD40

Gene Ontology

GO:0016021--C:integral component of membrane

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000321	Aegilops tauschii	64.53	0.00e+00	1065.00
IUUC-Atr-002897	Amborella trichopoda	76.15	0.00e+00	1640.00
IUUC-Aly-006154	Arabidopsis lyrata	79.06	0.00e+00	1766.00
IUUC-Ath-007285	Arabidopsis thaliana	79.05	0.00e+00	1771.00
IUUC-Bdi-014824	Brachypodium distachyon	77.59	0.00e+00	1640.00
IUUC-Bol-016428	Brassica oleracea	77.41	0.00e+00	1727.00
IUUC-Bra-017475	Brassica rapa	78.04	0.00e+00	1729.00
IUUC-Gma-043699	Glycine max	77.61	0.00e+00	1748.00
IUUC-Hvu-047404	Hordeum vulgare	81.06	3.00e-137	480.00
IUUC-Mtr-058798	Medicago truncatula	79.64	0.00e+00	1775.00
IUUC-Mac-065076	Musa acuminata	80.22	0.00e+00	1773.00
IUUC-Oba-075727	Oryza barthii	69.41	0.00e+00	1629.00
IUUC-Obr-076460	Oryza brachyantha	77.85	0.00e+00	1690.00
IUUC-Ogl-077837	Oryza glaberrima	71.52	0.00e+00	1711.00
IUUC-Ogu-078912	Oryza glumaepatula	69.29	0.00e+00	1626.00
IUUC-Oin-079644	Oryza indica	78.44	0.00e+00	1699.00
IUUC-Olo-080463	Oryza longistaminata	69.03	0.00e+00	1415.00
IUUC-Ome-081748	Oryza meridionalis	75.98	0.00e+00	1616.00
IUUC-Oni-083096	Oryza nivara	70.89	0.00e+00	1620.00
IUUC-Opu-083280	Oryza punctata	78.44	0.00e+00	1712.00
IUUC-Oru-084728	Oryza rufipogon	75.98	0.00e+00	1617.00
IUUC-Osa-085295	Oryza sativa	78.44	0.00e+00	1699.00
IUUC-Ppa-095297	Physcomitrella patens	61.25	0.00e+00	1279.00
IUUC-Ppe-101567	Prunus persica	77.90	0.00e+00	1866.00
IUUC-Smo-109297	Selaginella moellendorffii	61.70	0.00e+00	1315.00
IUUC-Sit-109913	Setaria italica	78.32	0.00e+00	1697.00
IUUC-Stu-112643	Solanum tuberosum	99.12	0.00e+00	2194.00
IUUC-Sbi-114411	Sorghum bicolor	78.94	0.00e+00	1363.00
IUUC-Tca-121691	Theobroma cacao	81.14	0.00e+00	1853.00
IUUC-Tae-124034	Triticum aestivum	77.67	0.00e+00	1612.00
IUUC-Tur-126798	Triticum urartu	76.92	0.00e+00	800.00
IUUC-Vvi-131320	Vitis vinifera	86.04	0.00e+00	1236.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence