iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114563

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000761

Gene Name

SORBI_002G090700

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb02g007513	Sb02g007513.1	Sb02g007513.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.10e-19	70.5	206	239

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf........sdtllvsGsdDgtikvWD 29
           Htd v+++a+        s  +++sGs Dg++ +W 
   Q: 206  HTDCVRDVAWapvlglakS--TIASGSQDGKVVIWT 239
           ***********88877543..69************4 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MSSKKIELDH KDIVHDSAID YYGKRLATAS SDSTVKIVNI GAANAPSQVL ATLSGHCGPV 60
WRVAWAHPKY GAILASCSYD GRVIIWKEDA RGNWSQAHVF SDQKASVNSI AWAPYEVGLC 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CGCATCTGGA TCTCGGCGGG CGGCCTTGGC CCTCTCTCTG TCCATCTCCC ATACCGGCGA 60
CGCTCTCCCT CATCCTCGGT GCTGCTGCTG TCCCTCAGCA TCAGCATCCT CCTATACAAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0003964--F:RNA-directed DNA polymerase activity

KEGG

sbi:SORBI_02g007500

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000731	Aegilops tauschii	77.78	5.00e-134	469.00
IUUC-Bdi-014445	Brachypodium distachyon	81.73	3.00e-142	496.00
IUUC-Cel-018479	Caenorhabditis elegans	40.40	3.00e-58	217.00
IUUC-Lpe-050873	Leersia perrieri	83.72	1.00e-147	514.00
IUUC-Oba-075365	Oryza barthii	85.05	2.00e-149	520.00
IUUC-Obr-076010	Oryza brachyantha	84.85	2.00e-144	503.00
IUUC-Ogl-077855	Oryza glaberrima	85.05	2.00e-149	520.00
IUUC-Ogu-078216	Oryza glumaepatula	85.38	1.00e-149	521.00
IUUC-Oin-079940	Oryza indica	85.38	1.00e-149	521.00
IUUC-Olo-080759	Oryza longistaminata	85.05	5.00e-148	516.00
IUUC-Ome-081141	Oryza meridionalis	85.38	1.00e-149	521.00
IUUC-Oni-082228	Oryza nivara	85.38	1.00e-149	521.00
IUUC-Opu-084097	Oryza punctata	85.19	3.00e-146	509.00
IUUC-Oru-084940	Oryza rufipogon	85.38	1.00e-149	521.00
IUUC-Osa-085681	Oryza sativa	77.74	7.00e-138	482.00
IUUC-Sit-109927	Setaria italica	91.69	5.00e-161	559.00
IUUC-Tae-125212	Triticum aestivum	78.11	4.00e-134	469.00
IUUC-Tur-126063	Triticum urartu	77.78	2.00e-133	467.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence