iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-100016

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Probable cytosolic iron-sulfur protein assembly protein CIAO1 homolog

Genbank Nucleotide ID

CM000337

Gene Name

POPTRDRAFT_172143; POPTR_0001s22820g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0001s22820	POPTR_0001s22820.1	POPTR_0001s22820.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	6.60e-47	156.5	19	55
UBD/Beta-Prp	1.00e-51	177.0	68	348

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.......sd.tllvsGsdDgtikvWD 29
           gH+d+v++la+       ++ + l+s+s+D+t+++W+
   Q: 19   GHSDRVWSLAWnpatgtsNNpPVLASCSGDKTVRIWE 55
           8***************9866899*************8 PP

UBD/Beta-Prp

   S: 4    tlkghhksvitcvkfspdksllatgsrdgtikvwdvttgkl..lrslsgheaevtavkfspdgkilvtgseDrtikvw...dlstgkcvht 89
           +l+++h+  +++ ++sp +++lat+s d+t+ +w++  g++  +++l+ghe+ev++v+++ +g++l+t+s+D+t+ +w   + + ++cv++
   Q: 68   VLEETHTRTVRSCAWSPCGKFLATASFDATTAIWENIGGDFecVSTLEGHENEVKCVSWNASGSLLATCSRDKTVWIWevmPGNEFECVSV 158
           68999**********************************9999***********************************555555******* PP
   S: 90   lkghedsvlslsfspsgdklvsGshdrtirvwdle.tg..qclee...tlsghdgvvncvvvhpdgnllvsGslDrtvrlWdl.....ktg 169
           l+gh+++v  ++++p+ d+l s s d+t++vw  + tg   c+++    ++gh+++v+ ++++ +gn +v++s+D t+++W       ++g
   Q: 159  LQGHTQDVKMVKWHPTMDVLFSCSYDNTVKVWAEDgTGdwHCVQSlgeSNNGHSSTVWALAFNAEGNRMVTCSDDLTLKIWETdvggmQSG 249
           *******************************94321221135555777***********************************99***666 PP
   S: 170  kllrtl......tgghtdsvyslsfdsngkelvsgsldgtvklwdlq.........tgecvrtlnghtdnvksvrfspnde.rlvsgssDg 244
           + l  +      +g+h++ + s+ ++++g  ++sg+ d  ++++  +          +  +++ ++h+  ++sv+  p ++ +l+s+s+Dg
   Q: 250  NDLVSWnhlctlSGYHDRTIFSVHWSREG-IIASGAADDALRFFVESkdglvdgpsYKLLLKREKAHEMDINSVQWGPGETgLLASTSDDG 339
           666666666666***************98.9***********997666555555544444*****************65553899****** PP
   S: 245  siriWdlrs 253
           +i+iW l +
   Q: 340  TIKIWELAT 348
           *****8765 PP

Organism

Populus trichocarpa

Functional Description
(View)

Essential component of the cytosolic iron-sulfur (Fe/S) protein assembly machinery. Required for the maturation of extramitochondrial Fe/S proteins.

Protein Sequence
(Fasta)

MEDLCDGNME LKEIQTLAGH SDRVWSLAWN PATGTSNNPP VLASCSGDKT VRIWEQTPSN 60
RLWHCKAVLE ETHTRTVRSC AWSPCGKFLA TASFDATTAI WENIGGDFEC VSTLEGHENE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GAGAGAGAGA GAGAGAGACG TATAGAAGCT TAACATCGGG AAGCCGAATT GATTTTGACC 60
ATGGAGGATT TGTGCGATGG CAACATGGAG TTGAAGGAGA TTCAAACCCT GGCAGGACAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR028608--CIAO1/Cia1
IPR003143--Cyt_cd1_C
IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0097361--C:CIA complex
GO:0016226--P:iron-sulfur cluster assembly

KEGG

pop:POPTR_0001s22820g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000874	Aegilops tauschii	54.35	4.00e-106	378.00
IUUC-Aml-001317	Ailuropoda melanoleuca	52.23	8.00e-81	293.00
IUUC-Atr-003029	Amborella trichopoda	70.89	7.00e-147	512.00
IUUC-Aly-006458	Arabidopsis lyrata	72.21	4.00e-151	526.00
IUUC-Ath-006671	Arabidopsis thaliana	71.92	4.00e-150	523.00
IUUC-Ago-007820	Ashbya gossypii	37.64	2.00e-50	192.00
IUUC-Acl-008042	Aspergillus clavatus	31.77	3.00e-43	168.00
IUUC-Afl-008639	Aspergillus flavus	32.41	2.00e-42	166.00
IUUC-Afu-008899	Aspergillus fumigatus	30.97	6.00e-42	164.00
IUUC-Ani-009453	Aspergillus nidulans	31.48	5.00e-41	161.00
IUUC-Ang-009758	Aspergillus niger	33.33	1.00e-42	166.00
IUUC-Aor-010212	Aspergillus oryzae	32.41	2.00e-42	166.00
IUUC-Ate-010314	Aspergillus terreus	32.69	7.00e-43	167.00
IUUC-Ame-010676	Astyanax mexicanus	49.70	2.00e-90	325.00
IUUC-Bgr-012095	Blumeria graminis	28.03	7.00e-32	130.00
IUUC-Bta-012884	Bos taurus	51.79	4.00e-81	294.00
IUUC-Bdi-014614	Brachypodium distachyon	67.15	2.00e-136	478.00
IUUC-Bol-016439	Brassica oleracea	70.94	8.00e-139	485.00
IUUC-Bra-016830	Brassica rapa	70.29	4.00e-138	483.00
IUUC-Cel-018709	Caenorhabditis elegans	39.58	4.00e-59	221.00
IUUC-Cja-019822	Callithrix jacchus	51.34	1.00e-80	292.00
IUUC-Cfa-020823	Canis familiaris	52.23	7.00e-81	293.00
IUUC-Cre-022811	Chlamydomonas reinhardtii	48.74	2.00e-89	321.00
IUUC-Csa-023754	Chlorocebus sabaeus	51.63	4.00e-81	294.00
IUUC-Cin-025395	Ciona intestinalis	43.86	3.00e-78	284.00
IUUC-Csv-025943	Ciona savignyi	44.44	4.00e-77	280.00
IUUC-Cgl-026435	Colletotrichum gloeosporioides	29.58	2.00e-30	126.00
IUUC-Cne-026939	Cryptococcus neoformans	28.12	2.00e-46	179.00
IUUC-Cme-027239	Cyanidioschyzon merolae	42.41	8.00e-43	167.00
IUUC-Dre-028172	Danio rerio	50.00	2.00e-91	328.00
IUUC-Dno-029472	Dasypus novemcinctus	53.12	1.00e-73	268.00
IUUC-Dor-031134	Dipodomys ordii	44.38	9.00e-62	229.00
IUUC-Dse-031535	Dothistroma septosporum	29.90	2.00e-37	149.00
IUUC-Dme-032020	Drosophila melanogaster	50.89	2.00e-94	338.00
IUUC-Eca-033700	Equus caballus	52.23	1.00e-80	292.00
IUUC-Eeu-035010	Erinaceus europaeus	50.45	6.00e-76	276.00
IUUC-Fca-036309	Felis catus	46.18	2.00e-74	271.00
IUUC-Fal-037243	Ficedula albicollis	54.84	5.00e-55	206.00
IUUC-Fox-038058	Fusarium oxysporum	29.19	5.00e-34	139.00
IUUC-Fso-038459	Fusarium solani	30.23	1.00e-34	140.00
IUUC-Gmo-039375	Gadus morhua	47.46	9.00e-80	289.00
IUUC-Ggr-040002	Gaeumannomyces graminis	32.42	3.00e-33	135.00
IUUC-Gga-040294	Gallus gallus	51.88	4.00e-67	247.00
IUUC-Gac-042499	Gasterosteus aculeatus	50.44	2.00e-80	291.00
IUUC-Gma-043543	Glycine max	77.71	6.00e-160	556.00
IUUC-Ggo-045181	Gorilla gorilla	51.63	4.00e-81	294.00
IUUC-Hsa-046528	Homo sapiens	51.63	4.00e-81	294.00
IUUC-Hvu-047341	Hordeum vulgare	70.44	6.00e-82	295.00
IUUC-Itr-048790	Ictidomys tridecemlineatus	51.47	3.00e-81	294.00
IUUC-Kpa-049353	Komagataella pastoris	35.04	4.00e-51	194.00
IUUC-Lch-049763	Latimeria chalumnae	51.32	2.00e-84	305.00
IUUC-Lpe-051500	Leersia perrieri	61.64	1.00e-128	452.00
IUUC-Loc-052021	Lepisosteus oculatus	51.47	8.00e-82	296.00
IUUC-Lma-053331	Leptosphaeria maculans	32.01	5.00e-43	169.00
IUUC-Laf-054558	Loxodonta africana	51.04	5.00e-80	290.00
IUUC-Mcc-055374	Macaca mulatta	51.63	8.00e-81	293.00
IUUC-Meu-056042	Macropus eugenii	56.07	1.00e-55	208.00
IUUC-Mor-057187	Magnaporthe oryzae	31.23	2.00e-35	143.00
IUUC-Mtr-058072	Medicago truncatula	76.83	1.00e-157	548.00
IUUC-Mla-059108	Melampsora laricipopulina	33.11	5.00e-56	211.00
IUUC-Mga-059370	Meleagris gallopavo	43.93	2.00e-45	175.00
IUUC-Mvi-060495	Microbotryum violaceum	35.34	1.00e-55	210.00
IUUC-Mmr-060902	Microcebus murinus	51.48	9.00e-82	296.00
IUUC-Mdo-062510	Monodelphis domestica	50.89	1.00e-78	285.00
IUUC-Mmu-063575	Mus musculus	51.93	1.00e-81	295.00
IUUC-Mac-065322	Musa acuminata	73.71	4.00e-152	530.00
IUUC-Mpu-065925	Mustela putorius furo	51.76	4.00e-81	294.00
IUUC-Mlu-067755	Myotis lucifugus	52.06	3.00e-81	294.00
IUUC-Nfi-068327	Neosartorya fischeri	32.19	4.00e-41	161.00
IUUC-Ncr-068845	Neurospora crassa	28.57	1.00e-29	123.00
IUUC-Nle-069406	Nomascus leucogenys	51.04	4.00e-78	284.00
IUUC-Opr-070416	Ochotona princeps	60.37	6.00e-41	160.00
IUUC-Ont-071936	Oreochromis niloticus	50.89	3.00e-82	297.00
IUUC-Oan-073452	Ornithorhynchus anatinus	54.71	6.00e-38	149.00
IUUC-Ocu-074791	Oryctolagus cuniculus	50.59	5.00e-81	293.00
IUUC-Oba-075636	Oryza barthii	68.14	5.00e-136	476.00
IUUC-Obr-076742	Oryza brachyantha	69.50	7.00e-117	412.00
IUUC-Ogl-077766	Oryza glaberrima	68.14	5.00e-136	476.00
IUUC-Ogu-079039	Oryza glumaepatula	67.85	3.00e-135	473.00
IUUC-Oin-079315	Oryza indica	70.38	3.00e-120	424.00
IUUC-Olo-080669	Oryza longistaminata	59.43	5.00e-127	446.00
IUUC-Ome-081490	Oryza meridionalis	68.24	9.00e-137	479.00
IUUC-Oni-082572	Oryza nivara	68.14	5.00e-136	476.00
IUUC-Opu-083732	Oryza punctata	67.65	7.00e-136	476.00
IUUC-Oru-084763	Oryza rufipogon	68.14	5.00e-136	476.00
IUUC-Osa-085372	Oryza sativa	68.14	5.00e-136	476.00
IUUC-Ola-087379	Oryzias latipes	49.85	2.00e-80	291.00
IUUC-Olu-087801	Ostreococcus lucimarinus	39.40	6.00e-58	217.00
IUUC-Oga-089076	Otolemur garnettii	51.03	3.00e-81	294.00
IUUC-Oar-090022	Ovis aries	51.79	2.00e-81	295.00
IUUC-Ptr-090809	Pan troglodytes	51.63	4.00e-81	294.00
IUUC-Pan-091685	Papio anubis	51.79	9.00e-82	297.00
IUUC-Psi-093046	Pelodiscus sinensis	50.59	2.00e-79	288.00
IUUC-Pma-094181	Petromyzon marinus	48.84	1.00e-87	315.00
IUUC-Pno-094882	Phaeosphaeria nodorum	30.99	4.00e-41	161.00
IUUC-Ppa-095172	Physcomitrella patens	58.09	1.00e-112	399.00
IUUC-Pfo-096396	Poecilia formosa	50.00	1.00e-81	295.00
IUUC-Pab-098427	Pongo abelii	51.64	4.00e-81	293.00
IUUC-Pca-101048	Procavia capensis	51.64	2.00e-80	291.00
IUUC-Ppe-102050	Prunus persica	77.55	1.00e-157	548.00
IUUC-Pva-103117	Pteropus vampyrus	52.23	1.00e-81	295.00
IUUC-Pgr-103307	Puccinia graminis	35.49	3.00e-60	225.00
IUUC-Ptt-103938	Puccinia triticina	38.16	3.00e-46	178.00
IUUC-Pte-104315	Pyrenophora teres	31.32	6.00e-43	167.00
IUUC-Pyt-104825	Pyrenophora triticirepentis	31.32	1.00e-42	166.00
IUUC-Rno-105523	Rattus norvegicus	52.23	8.00e-82	296.00
IUUC-Sce-106297	Saccharomyces cerevisiae	39.66	2.00e-52	198.00
IUUC-Sha-106981	Sarcophilus harrisii	51.90	2.00e-70	258.00
IUUC-Sja-107715	Schizosaccharomyces japonicus	39.42	7.00e-59	221.00
IUUC-Spo-108214	Schizosaccharomyces pombe	38.79	6.00e-59	221.00
IUUC-Smo-109034	Selaginella moellendorffii	54.78	4.00e-108	384.00
IUUC-Sit-110663	Setaria italica	68.91	3.00e-138	483.00
IUUC-Sly-110898	Solanum lycopersicum	72.83	4.00e-143	499.00
IUUC-Stu-112647	Solanum tuberosum	73.16	2.00e-118	417.00
IUUC-Sbi-114288	Sorghum bicolor	68.80	8.00e-137	479.00
IUUC-Sre-115065	Sporisorium reilianum	37.84	1.00e-69	256.00
IUUC-Ssc-115960	Sus scrofa	48.51	7.00e-83	300.00
IUUC-Tru-118382	Takifugu rubripes	51.62	2.00e-93	334.00
IUUC-Tsy-119585	Tarsius syrichta	46.57	3.00e-67	248.00
IUUC-Tni-120133	Tetraodon nigroviridis	50.00	1.00e-85	309.00
IUUC-Tca-121167	Theobroma cacao	81.32	9.00e-164	568.00
IUUC-Tre-122119	Trichoderma reesei	27.92	1.00e-34	140.00
IUUC-Tvi-122407	Trichoderma virens	28.78	3.00e-37	149.00
IUUC-Tae-124928	Triticum aestivum	65.89	6.00e-128	449.00
IUUC-Tur-126682	Triticum urartu	69.08	3.00e-105	373.00
IUUC-Tme-127095	Tuber melanosporum	34.50	2.00e-51	195.00
IUUC-Tbe-128004	Tupaia belangeri	51.76	4.00e-81	294.00
IUUC-Ttr-129284	Tursiops truncatus	50.44	2.00e-77	281.00
IUUC-Uma-129527	Ustilago maydis	37.93	3.00e-70	258.00
IUUC-Vda-129854	Verticillium dahliae	29.50	2.00e-32	132.00
IUUC-Vpa-130681	Vicugna pacos	68.42	1.00e-32	132.00
IUUC-Vvi-131004	Vitis vinifera	79.37	1.00e-157	548.00
IUUC-Xtr-131928	Xenopus tropicalis	50.30	1.00e-79	288.00
IUUC-Xma-134290	Xiphophorus maculatus	50.00	1.00e-79	289.00
IUUC-Yli-134364	Yarrowia lipolytica	42.25	4.00e-61	227.00
IUUC-Zma-135658	Zea mays	68.60	2.00e-136	478.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence