iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Yli-134648

Ensembl Protein ID

CAG78082

UniProt Accession

Q6C237; Q6C237_YARLI

Genbank Protein ID

CAG78082.1

Protein Name

YALI0F11165p

Genbank Nucleotide ID

CR382132

Gene Name

YALI0_F11165g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
YALI0_F11165g	CAG78082	CAG78082

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	5.80e-20	69.0	433	463

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sdtllvsGsdDgtikvWD 29
           gH++++++++f   + ll+s+sdD+++++W 
   Q: 433  GHSAGINDIQFdhVGLLLASASDDHSVRLWQ 463
           8**********6433779************6 PP

Organism

Yarrowia lipolytica

Protein Sequence
(Fasta)

MSITSDELNY LVWRYLQEAG FEHTTYAFQR EAGVHHLDKH FSNRIPLGAL VNVAQKGIQF 60
MEVEASVKED GTIVDSDDKP FSLFGNDYVR SGTPEIEEEQ TNALKGAATA LLAAPSDITA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTCAATCA CATCGGACGA GCTAAACTAC CTGGTGTGGC GGTATCTGCA GGAGGCGGGT 60
TTCGAACATA CAACATATGC GTTTCAGCGC GAGGCGGGCG TCCATCATTT GGACAAGCAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR006594--LisH
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50896--LISH
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08513--LisH
PF00400--WD40

SMART

SM00667--LisH
SM00320--WD40

Gene Ontology

GO:0034967--C:Set3 complex
GO:0003714--F:transcription corepressor activity
GO:0016575--P:histone deacetylation
GO:0006357--P:regulation of transcription from RNA polymerase II promoter

KEGG

yli:YALI0F11165g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001450	Ailuropoda melanoleuca	26.65	3.00e-42	164.00
IUUC-Atr-002514	Amborella trichopoda	28.27	3.00e-42	164.00
IUUC-Apl-003232	Anas platyrhynchos	26.73	1.00e-56	212.00
IUUC-Aca-005035	Anolis carolinensis	26.55	1.00e-58	218.00
IUUC-Aly-005622	Arabidopsis lyrata	27.87	5.00e-37	147.00
IUUC-Ath-007137	Arabidopsis thaliana	28.57	5.00e-38	150.00
IUUC-Ago-007869	Ashbya gossypii	28.13	7.00e-36	142.00
IUUC-Ame-011601	Astyanax mexicanus	28.92	8.00e-40	155.00
IUUC-Bta-013202	Bos taurus	27.08	2.00e-58	218.00
IUUC-Bdi-014315	Brachypodium distachyon	28.87	2.00e-43	167.00
IUUC-Bol-016277	Brassica oleracea	29.62	5.00e-39	153.00
IUUC-Bra-016944	Brassica rapa	29.62	4.00e-39	154.00
IUUC-Cja-019281	Callithrix jacchus	26.90	1.00e-58	219.00
IUUC-Cfa-020929	Canis familiaris	29.62	2.00e-42	164.00
IUUC-Cpo-021682	Cavia porcellus	27.20	3.00e-42	164.00
IUUC-Cre-022979	Chlamydomonas reinhardtii	27.10	6.00e-35	139.00
IUUC-Csa-023943	Chlorocebus sabaeus	26.42	9.00e-57	212.00
IUUC-Cho-024872	Choloepus hoffmanni	46.75	1.00e-16	79.00
IUUC-Cin-025704	Ciona intestinalis	26.41	2.00e-55	207.00
IUUC-Csv-026257	Ciona savignyi	26.49	7.00e-56	209.00
IUUC-Cne-026946	Cryptococcus neoformans	25.62	5.00e-15	74.30
IUUC-Cme-027258	Cyanidioschyzon merolae	25.88	2.00e-47	181.00
IUUC-Dre-027586	Danio rerio	27.69	2.00e-58	218.00
IUUC-Dno-029196	Dasypus novemcinctus	28.22	3.00e-39	154.00
IUUC-Dor-030732	Dipodomys ordii	28.22	5.00e-39	153.00
IUUC-Dme-031939	Drosophila melanogaster	27.53	4.00e-37	147.00
IUUC-Ete-033150	Echinops telfairi	28.22	6.00e-39	153.00
IUUC-Eca-033897	Equus caballus	26.90	4.00e-57	213.00
IUUC-Eeu-034952	Erinaceus europaeus	27.64	4.00e-34	137.00
IUUC-Fca-036462	Felis catus	26.90	7.00e-58	216.00
IUUC-Fal-037388	Ficedula albicollis	26.37	7.00e-58	216.00
IUUC-Gmo-038870	Gadus morhua	28.57	8.00e-39	152.00
IUUC-Gga-040671	Gallus gallus	26.55	7.00e-58	216.00
IUUC-Gac-041851	Gasterosteus aculeatus	29.97	1.00e-42	165.00
IUUC-Gma-042880	Glycine max	28.87	1.00e-38	152.00
IUUC-Ggo-045373	Gorilla gorilla	27.56	4.00e-58	216.00
IUUC-Hsa-046373	Homo sapiens	26.73	5.00e-58	216.00
IUUC-Itr-048236	Ictidomys tridecemlineatus	26.65	3.00e-42	163.00
IUUC-Kpa-049338	Komagataella pastoris	29.86	7.00e-37	146.00
IUUC-Lch-050535	Latimeria chalumnae	26.24	2.00e-57	214.00
IUUC-Lpe-051084	Leersia perrieri	28.57	7.00e-43	166.00
IUUC-Loc-052722	Lepisosteus oculatus	29.62	1.00e-41	162.00
IUUC-Laf-054071	Loxodonta africana	27.43	1.00e-58	218.00
IUUC-Mcc-055124	Macaca mulatta	29.97	1.00e-42	165.00
IUUC-Meu-056563	Macropus eugenii	27.27	2.00e-36	144.00
IUUC-Mtr-058681	Medicago truncatula	27.30	4.00e-41	160.00
IUUC-Mga-059895	Meleagris gallopavo	26.73	4.00e-58	217.00
IUUC-Mvi-060557	Microbotryum violaceum	29.45	4.00e-35	141.00
IUUC-Mmr-061286	Microcebus murinus	27.26	9.00e-58	215.00
IUUC-Mdo-062200	Monodelphis domestica	28.22	9.00e-40	155.00
IUUC-Mmu-063447	Mus musculus	27.08	1.00e-58	218.00
IUUC-Mac-065508	Musa acuminata	31.19	8.00e-33	132.00
IUUC-Mpu-066741	Mustela putorius furo	28.22	3.00e-39	154.00
IUUC-Mlu-067852	Myotis lucifugus	29.97	1.00e-41	162.00
IUUC-Nle-069151	Nomascus leucogenys	26.60	2.00e-56	211.00
IUUC-Ont-072252	Oreochromis niloticus	27.30	2.00e-61	227.00
IUUC-Oan-073562	Ornithorhynchus anatinus	27.43	5.00e-59	219.00
IUUC-Ocu-074280	Oryctolagus cuniculus	26.02	1.00e-54	205.00
IUUC-Oba-075618	Oryza barthii	28.31	5.00e-38	150.00
IUUC-Obr-076718	Oryza brachyantha	28.57	2.00e-42	165.00
IUUC-Ogl-077302	Oryza glaberrima	29.23	4.00e-43	167.00
IUUC-Ogu-078718	Oryza glumaepatula	29.23	3.00e-43	167.00
IUUC-Oin-079515	Oryza indica	31.35	1.00e-26	113.00
IUUC-Olo-080427	Oryza longistaminata	29.23	1.00e-42	165.00
IUUC-Ome-081696	Oryza meridionalis	28.92	2.00e-40	157.00
IUUC-Oni-082137	Oryza nivara	29.23	3.00e-43	167.00
IUUC-Opu-083505	Oryza punctata	27.98	9.00e-39	152.00
IUUC-Oru-085276	Oryza rufipogon	29.23	3.00e-43	167.00
IUUC-Osa-085791	Oryza sativa	29.23	3.00e-43	167.00
IUUC-Ola-087365	Oryzias latipes	27.39	3.00e-40	157.00
IUUC-Olu-087589	Ostreococcus lucimarinus	26.74	2.00e-46	178.00
IUUC-Oga-088365	Otolemur garnettii	29.09	2.00e-38	152.00
IUUC-Oar-089506	Ovis aries	29.62	1.00e-42	165.00
IUUC-Ptr-091532	Pan troglodytes	28.22	3.00e-39	154.00
IUUC-Pan-091909	Papio anubis	27.66	5.00e-58	216.00
IUUC-Psi-093358	Pelodiscus sinensis	29.62	2.00e-42	164.00
IUUC-Pma-094105	Petromyzon marinus	26.90	8.00e-16	75.50
IUUC-Ppa-095868	Physcomitrella patens	29.97	2.00e-41	161.00
IUUC-Pfo-097214	Poecilia formosa	26.77	5.00e-60	223.00
IUUC-Pab-098317	Pongo abelii	27.30	8.00e-58	216.00
IUUC-Pop-098989	Populus trichocarpa	28.62	2.00e-38	150.00
IUUC-Pca-100256	Procavia capensis	28.22	3.00e-39	154.00
IUUC-Ppe-101572	Prunus persica	31.01	2.00e-42	165.00
IUUC-Pva-102616	Pteropus vampyrus	28.22	2.00e-39	154.00
IUUC-Rno-105857	Rattus norvegicus	27.08	1.00e-58	218.00
IUUC-Sce-106132	Saccharomyces cerevisiae	28.05	6.00e-55	206.00
IUUC-Sha-107326	Sarcophilus harrisii	26.73	2.00e-59	220.00
IUUC-Smo-109301	Selaginella moellendorffii	27.98	6.00e-40	156.00
IUUC-Sit-110710	Setaria italica	29.17	2.00e-43	168.00
IUUC-Sly-111717	Solanum lycopersicum	28.32	3.00e-42	164.00
IUUC-Stu-112786	Solanum tuberosum	26.74	3.00e-39	154.00
IUUC-Sar-112971	Sorex araneus	27.53	6.00e-37	146.00
IUUC-Sbi-114420	Sorghum bicolor	28.87	4.00e-43	167.00
IUUC-Sre-115175	Sporisorium reilianum	35.38	3.00e-30	125.00
IUUC-Ssc-115646	Sus scrofa	27.26	2.00e-57	214.00
IUUC-Tgu-116898	Taeniopygia guttata	26.90	2.00e-57	214.00
IUUC-Tru-117862	Takifugu rubripes	27.26	2.00e-58	217.00
IUUC-Tni-119656	Tetraodon nigroviridis	27.30	5.00e-57	213.00
IUUC-Tca-121739	Theobroma cacao	25.85	3.00e-33	134.00
IUUC-Tae-125368	Triticum aestivum	28.27	2.00e-42	164.00
IUUC-Tur-126856	Triticum urartu	28.93	3.00e-20	90.90
IUUC-Tme-127126	Tuber melanosporum	22.86	2.00e-26	111.00
IUUC-Tbe-127767	Tupaia belangeri	28.57	9.00e-41	158.00
IUUC-Ttr-128826	Tursiops truncatus	26.73	1.00e-56	211.00
IUUC-Uma-129469	Ustilago maydis	33.33	2.00e-29	122.00
IUUC-Vpa-130768	Vicugna pacos	28.22	3.00e-39	154.00
IUUC-Vvi-131193	Vitis vinifera	29.27	2.00e-41	161.00
IUUC-Xtr-132842	Xenopus tropicalis	28.22	2.00e-39	154.00
IUUC-Xma-133591	Xiphophorus maculatus	26.60	9.00e-60	222.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence