iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tca-121042

Ensembl Protein ID

EOY31603

UniProt Accession

A0A061GQC4; A0A061GQC4_THECC

Genbank Protein ID

EOY31603.1

Protein Name

RING-H2 finger protein ATL13

Genbank Nucleotide ID

CM001887

Gene Name

TCM_038570

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TCM_038570	EOY31603	EOY31603

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	2.90e-06	28.6	132	174

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+Cl++f  +d +++lp C H+fh +C+  w         + +CPlCr
   Q: 132  CAVCLCEFepEDKLRLLPkCSHAFHMECIDTW------LLSHSTCPLCR 174
           ********88666*******************......89999*****8 PP

Organism

Theobroma cacao

Protein Sequence
(Fasta)

MDWIFHEIKQ RSLLSPSEQP YYLPQSSPLM PPPQNLHSDS FNLNNKVSPS ILLIIIILAI 60
IFFVSGLLHL LVRFLLRPPN REPEDIDNVT ALQGQLQQLF HLHDAGVDQS FIDTLPIFHY 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AAACAGGCAT TGGGGTTGAT GCATCAAAGG GTTCCGTTTT AAGTCAACCC CTGAAAGAGC 60
CTTGTATTTG ATGAATTCTT GACAAAACTC ACCTTATTTA TAATTTTTAA CCATAGACAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002500	Amborella trichopoda	54.17	3.00e-98	351.00
IUUC-Aly-006179	Arabidopsis lyrata	51.32	5.00e-84	304.00
IUUC-Ath-006858	Arabidopsis thaliana	50.67	3.00e-87	314.00
IUUC-Ago-007872	Ashbya gossypii	37.78	1.00e-11	61.60
IUUC-Bdi-014934	Brachypodium distachyon	44.82	2.00e-64	239.00
IUUC-Bol-016067	Brassica oleracea	51.97	1.00e-90	326.00
IUUC-Bra-017063	Brassica rapa	51.43	3.00e-88	318.00
IUUC-Gma-043592	Glycine max	65.24	4.00e-140	490.00
IUUC-Hvu-047392	Hordeum vulgare	56.00	2.00e-57	215.00
IUUC-Lpe-051680	Leersia perrieri	46.12	3.00e-70	258.00
IUUC-Mtr-058782	Medicago truncatula	66.09	8.00e-134	469.00
IUUC-Mvi-060267	Microbotryum violaceum	44.07	1.00e-11	65.10
IUUC-Mac-064639	Musa acuminata	49.64	9.00e-101	359.00
IUUC-Oba-075403	Oryza barthii	45.76	4.00e-71	261.00
IUUC-Obr-076503	Oryza brachyantha	45.47	3.00e-65	241.00
IUUC-Ogl-077574	Oryza glaberrima	45.86	3.00e-71	261.00
IUUC-Ogu-077986	Oryza glumaepatula	45.86	3.00e-71	261.00
IUUC-Oin-079091	Oryza indica	46.07	3.00e-72	265.00
IUUC-Olo-080854	Oryza longistaminata	45.77	1.00e-49	189.00
IUUC-Ome-081627	Oryza meridionalis	46.09	4.00e-69	254.00
IUUC-Oni-082260	Oryza nivara	45.86	3.00e-71	261.00
IUUC-Opu-083578	Oryza punctata	46.93	2.00e-72	265.00
IUUC-Oru-084794	Oryza rufipogon	45.86	3.00e-71	261.00
IUUC-Osa-085348	Oryza sativa	45.86	3.00e-71	261.00
IUUC-Pop-099449	Populus trichocarpa	68.24	6.00e-174	602.00
IUUC-Ppe-101557	Prunus persica	72.28	1.00e-175	608.00
IUUC-Pgr-103263	Puccinia graminis	47.37	7.00e-12	65.50
IUUC-Smo-109112	Selaginella moellendorffii	73.13	2.00e-28	115.00
IUUC-Sit-109852	Setaria italica	45.41	3.00e-73	268.00
IUUC-Sly-111133	Solanum lycopersicum	56.37	5.00e-116	410.00
IUUC-Stu-112868	Solanum tuberosum	57.59	2.00e-116	411.00
IUUC-Sbi-114435	Sorghum bicolor	47.45	1.00e-74	273.00
IUUC-Tae-124510	Triticum aestivum	42.04	4.00e-63	234.00
IUUC-Tur-126047	Triticum urartu	43.40	1.00e-57	215.00
IUUC-Vvi-130906	Vitis vinifera	70.78	3.00e-171	594.00
IUUC-Zma-135271	Zea mays	46.79	1.00e-70	259.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence