iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Aly-005713

UUCD1 version

UUC-ArL-00719

Ensembl Protein ID

fgenesh2_kg.3__508__AT3G05200.1

UniProt Accession

D7L3R6; D7L3R6_ARALL

Genbank Protein ID

EFH58661.1

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

GL348715

Gene Name

ATL6; ARALYDRAFT_477807

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
fgenesh2_kg.3__508__AT3G05200.1	fgenesh2_kg.3__508__AT3G05200.1	fgenesh2_kg.3__508__AT3G05200.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	8.90e-09	36.4	128	170

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           CaiCl++f  ++ +++lp C Hvfh +C+ +w         + +CP+Cr
   Q: 128  CAICLNEFedDETLRLLPkCDHVFHPHCIDAW------LEAHVTCPVCR 170
           ********6544499999**************......**********8 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MRSSDHTPFS GVLPIVFLLI LSSADLAASQ SQPGPANQPY NYGRLSPAMA VIVVILIAAL 60
FFMGFFSIYF RHCSGVPDAG VSPAGGARSR ATVNAAARGL DASVVETFPT FLYSDVKTQK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTCATTTCAC AAATTTGAGG AAACTATACA AAATTAGCCA TCGGATTAAA ATGGAAAATA 60
ACAAGCCGAA AAGCTGCTAT TCTCAGAAAT AACAAATATA CTTGAATGTA ATAAAAATTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0732--Signal
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0005886--C:plasma membrane
GO:0004842--F:ubiquitin-protein transferase activity
GO:0008270--F:zinc ion binding
GO:0009816--P:defense response to bacterium, incompatible interaction
GO:0010200--P:response to chitin

KEGG

aly:ARALYDRAFT_477807

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000107	Aegilops tauschii	38.52	3.00e-30	124.00
IUUC-Atr-002716	Amborella trichopoda	42.44	2.00e-56	211.00
IUUC-Ath-006746	Arabidopsis thaliana	97.24	0.00e+00	706.00
IUUC-Bdi-014474	Brachypodium distachyon	58.90	8.00e-45	173.00
IUUC-Bol-016322	Brassica oleracea	82.54	7.00e-166	576.00
IUUC-Bra-017990	Brassica rapa	80.70	2.00e-157	548.00
IUUC-Gma-043536	Glycine max	47.30	4.00e-57	214.00
IUUC-Hvu-047493	Hordeum vulgare	41.60	2.00e-50	191.00
IUUC-Lpe-051270	Leersia perrieri	54.39	7.00e-47	180.00
IUUC-Mtr-058791	Medicago truncatula	47.77	2.00e-57	215.00
IUUC-Oba-075528	Oryza barthii	52.90	1.00e-42	166.00
IUUC-Obr-076839	Oryza brachyantha	56.77	6.00e-47	180.00
IUUC-Ogl-076953	Oryza glaberrima	53.25	7.00e-43	167.00
IUUC-Ogu-078122	Oryza glumaepatula	53.25	9.00e-43	166.00
IUUC-Oin-079189	Oryza indica	53.25	8.00e-43	167.00
IUUC-Ome-081499	Oryza meridionalis	52.56	8.00e-42	163.00
IUUC-Oni-082648	Oryza nivara	53.25	8.00e-43	167.00
IUUC-Opu-083745	Oryza punctata	42.66	2.00e-45	175.00
IUUC-Oru-084417	Oryza rufipogon	53.25	1.00e-42	166.00
IUUC-Osa-085388	Oryza sativa	53.25	6.00e-43	167.00
IUUC-Pop-098838	Populus trichocarpa	48.80	7.00e-71	260.00
IUUC-Ppe-101166	Prunus persica	46.31	8.00e-68	249.00
IUUC-Sit-109787	Setaria italica	60.00	6.00e-51	194.00
IUUC-Sbi-114136	Sorghum bicolor	64.12	3.00e-47	181.00
IUUC-Tca-120966	Theobroma cacao	46.27	7.00e-72	263.00
IUUC-Tae-124246	Triticum aestivum	59.85	7.00e-45	173.00
IUUC-Tur-126779	Triticum urartu	38.13	3.00e-35	140.00
IUUC-Vvi-131515	Vitis vinifera	44.90	1.00e-64	239.00
IUUC-Yli-134336	Yarrowia lipolytica	37.23	4.00e-12	66.20

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence