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Basic Information Integrated Annotations

Tag Content
iUUCD ID IUUC-Hsa-046449
UUCD1 version UUC-HoS-01200
Ensembl Protein ID ENSP00000283290.5
UniProt Accession Q9NT62; Q6PKC5; Q9H6L9; ATG3_HUMAN
Genbank Protein ID BAB90843.1; AAG35611.1; CAB70781.1; AAH02830.1; AAH24221.1; BAB15237.1
Protein Name Ubiquitin-like-conjugating enzyme ATG3; Autophagy-related protein 3; Protein PC3-96
Genbank Nucleotide ID AB079384; AF202092; AL137515; BC002830; BC024221; AK025778
Gene Name ATG3; APG3; APG3L
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSG00000144848.10 ENST00000283290.9 ENSP00000283290.5
ENSG00000144848.10 ENST00000402314.6 ENSP00000385943.2
ENSG00000144848.10 ENST00000496423.1 ENSP00000420259.1
Annotation
Cancer Mutation
TCGAICGCCOSMICCGAP
IntOGen
Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEOArrayExpressTCGAICGC
COSMICTHPAHPM
DNA & RNA Element
UTRdbAREsitecircBasecircRNADb
CircNetmiRTarBasemicroRNATRANSFAC
miRWalkTargetScanRepTarSomamiR
miRcodeRAID2
Protein-protein Interaction
IIDiRefIndexPINAHINT
MenthaInWeb_IM
Protein 3D Structure
PDBMMDB
Disease-associated Information
GWASdbOMIM
Post-translational Modifications (PTMs)
CPLMdbPAFPhosphositePlusdbPTM
HPRDPhospho.ELMUniProtBioGRID
mUbiSiDa
DNA Methylation
TCGAICGC
Protein Expression/Proteomics
THPAHPMGPMDB
Status Reviewed
Details
Family Domain References (PMIDs)
E2/Autophagy_C Autophagy_C 18690009; 20723759
Reviewed
Classification
Family Identity E-value Score Source Orthology
E2/Autophagy_C 45.95 3.00e-62 235.00 IUUC-Ath-006802
E2/Autophagy_C 34.26 2.00e-38 154.00 IUUC-Sce-106172
Organism Homo sapiens
Functional Description
(View)

Functional Description



     E2 conjugating enzyme required for the cytoplasm to vacuole transport (Cvt), autophagy, and mitochondrial homeostasis. Responsible for the E2-like covalent binding of phosphatidylethanolamine to the C-terminal Gly of ATG8-like proteins (GABARAP, GABARAPL1, GABARAPL2 or MAP1LC3A). The ATG12-ATG5 conjugate plays a role of an E3 and promotes the transfer of ATG8-like proteins from ATG3 to phosphatidylethanolamine (PE). This step is required for the membrane association of ATG8-like proteins. The formation of the ATG8-phosphatidylethanolamine conjugates is essential for autophagy and for the cytoplasm to vacuole transport (Cvt). Preferred substrate is MAP1LC3A. Also acts as an autocatalytic E2-like enzyme, catalyzing the conjugation of ATG12 to itself, ATG12 conjugation to ATG3 playing a role in mitochondrial homeostasis but not in autophagy. ATG7 (E1-like enzyme) facilitates this reaction by forming an E1-E2 complex with ATG3. Promotes primary ciliogenesis by removing OFD1 from centriolar satellites via the autophagic pathway.
E2 conjugating enzyme required for the cytoplasm to vacuole transport (Cvt), autophagy, and mitochondrial homeostasis. Responsible for the E2-like covalent binding of phosphatidylethanolamine to the C-terminal Gly of ATG8-like proteins (GABARAP, GABARAPL1, GABARAPL2 or MAP1LC3A). The ATG12-ATG5 conjugate plays a role of an E3 and promotes the transfer of ATG8-like proteins from ATG3 to phosphatidylethanolamine (PE). This step is required for the membrane association of ATG8-like proteins. The formation of the ATG8-phosphatidylethanolamine conjugates is essential for autophagy and for the cytoplasm to vacuole transport (Cvt). Preferred substrate is MAP1LC3A. Also acts as an autocatalytic E2-like enzyme, catalyzing the conjugation of ATG12 to itself, ATG12 conjugation to ATG3 playing a role in mitochondrial homeostasis but not in autophagy. ATG7 (E1-like enzyme) facilitates this reaction by forming an E1-E2 complex with ATG3. Promotes primary ciliogenesis by removing OFD1 from centriolar satellites via the autophagic pathway.
Protein Sequence
(Fasta)
MQNVINTVKG KALEVAEYLT PVLKESKFKE TGVITPEEFV AAGDHLVHHC PTWQWATGEE 60
LKVKAYLPTG KQFLVTKNVP CYKRCKQMEY SDELEAIIEE DDGDGGWVDT YHNTGITGIT 120
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Protein Fasta Sequence



>IUUC-Hsa-046449|E2,E2/Autophagy_C|Homo sapiens
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Nucleotide Sequence
(Fasta)
GTGTTACGCT TCCGGAAGGA GGGGAGAAGC GGCTTATCCC GCCCCAGCCC GGCCCCTTTC 60
TCACGTCACG TGCCGGGAGA GTCTAGTGTC ACGTGAGGCC CCGGTGGCGG CGCAGCTACG 120
It may take some time, please wait.

Nucleotide Fasta Sequence



>IUUC-Hsa-046449|E2,E2/Autophagy_C|Homo sapiens
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0002--3D-structure
KW-0007--Acetylation
KW-0025--Alternative splicing
KW-0072--Autophagy
KW-0181--Complete proteome
KW-0963--Cytoplasm
KW-1017--Isopeptide bond
KW-0436--Ligase
KW-0653--Protein transport
KW-1185--Reference proteome
KW-0813--Transport
KW-0832--Ubl conjugation
KW-0833--Ubl conjugation pathway

Interpro

IPR007135--Autophagy-rel_prot_3
IPR019461--Autophagy-rel_prot_3_C
IPR007134--Autophagy-rel_prot_3_N

Pfam

PF03987--Autophagy_act_C
PF10381--Autophagy_C
PF03986--Autophagy_N

Gene Ontology

GO:0000153--C:cytoplasmic ubiquitin ligase complex
GO:0005829--C:cytosol
GO:0019777--F:Atg12 transferase activity
GO:0019776--F:Atg8 ligase activity
GO:0019899--F:enzyme binding
GO:0016874--F:ligase activity
GO:0019787--F:ubiquitin-like protein transferase activity
GO:0000045--P:autophagosome assembly
GO:0006464--P:cellular protein modification process
GO:0016236--P:macroautophagy
GO:0043653--P:mitochondrial fragmentation involved in apoptotic process
GO:0000422--P:mitophagy
GO:0050765--P:negative regulation of phagocytosis
GO:0044804--P:nucleophagy
GO:0006612--P:protein targeting to membrane
GO:0016567--P:protein ubiquitination
GO:1902017--P:regulation of cilium assembly

KEGG hsa:64422
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-001111 Aegilops tauschii 43.45 3.00e-47 182.00
IUUC-Aml-002081 Ailuropoda melanoleuca 97.13 2.00e-170 591.00
IUUC-Atr-002712 Amborella trichopoda 43.48 1.00e-52 199.00
IUUC-Apl-003956 Anas platyrhynchos 75.65 9.00e-120 422.00
IUUC-Aca-004578 Anolis carolinensis 88.57 1.00e-159 555.00
IUUC-Aly-005823 Arabidopsis lyrata 45.79 3.00e-65 241.00
IUUC-Ath-006802 Arabidopsis thaliana 46.13 1.00e-65 243.00
IUUC-Ago-007855 Ashbya gossypii 37.91 4.00e-23 101.00
IUUC-Acl-008147 Aspergillus clavatus 35.96 9.00e-30 124.00
IUUC-Afl-008483 Aspergillus flavus 53.52 5.00e-18 85.10
IUUC-Afu-008818 Aspergillus fumigatus 31.94 9.00e-37 147.00
IUUC-Ani-009481 Aspergillus nidulans 51.76 9.00e-18 84.70
IUUC-Ang-009800 Aspergillus niger 37.84 5.00e-21 95.10
IUUC-Aor-010150 Aspergillus oryzae 53.52 5.00e-18 85.10
IUUC-Ate-010545 Aspergillus terreus 53.95 4.00e-17 81.60
IUUC-Ame-011793 Astyanax mexicanus 84.01 4.00e-155 540.00
IUUC-Bgr-012167 Blumeria graminis 48.84 2.00e-17 83.60
IUUC-Bta-012695 Bos taurus 98.09 1.00e-172 598.00
IUUC-Bci-013972 Botrytis cinerea 54.05 3.00e-18 85.90
IUUC-Bdi-014756 Brachypodium distachyon 44.59 4.00e-59 221.00
IUUC-Bol-015091 Brassica oleracea 43.95 2.00e-61 229.00
IUUC-Bra-017220 Brassica rapa 43.87 5.00e-63 234.00
IUUC-Cel-018143 Caenorhabditis elegans 50.80 5.00e-81 294.00
IUUC-Cja-018991 Callithrix jacchus 93.65 7.00e-175 606.00
IUUC-Cfa-020070 Canis familiaris 97.74 7.00e-170 589.00
IUUC-Cpo-021860 Cavia porcellus 98.09 1.00e-172 598.00
IUUC-Cre-022948 Chlamydomonas reinhardtii 55.93 2.00e-40 159.00
IUUC-Csa-023881 Chlorocebus sabaeus 99.04 8.00e-174 602.00
IUUC-Cho-024852 Choloepus hoffmanni 85.03 3.00e-155 540.00
IUUC-Cin-025787 Ciona intestinalis 64.35 1.00e-108 386.00
IUUC-Csv-026369 Ciona savignyi 64.24 2.00e-106 378.00
IUUC-Cgl-026680 Colletotrichum gloeosporioides 35.03 1.00e-19 90.10
IUUC-Cne-026905 Cryptococcus neoformans 39.13 7.00e-49 187.00
IUUC-Dre-028811 Danio rerio 81.07 6.00e-152 530.00
IUUC-Dno-030081 Dasypus novemcinctus 92.72 5.00e-166 576.00
IUUC-Dor-030183 Dipodomys ordii 97.71 2.00e-73 269.00
IUUC-Dse-031539 Dothistroma septosporum 43.48 1.00e-11 64.30
IUUC-Dme-031805 Drosophila melanogaster 61.52 2.00e-102 365.00
IUUC-Ete-033171 Echinops telfairi 90.76 6.00e-164 569.00
IUUC-Eca-034083 Equus caballus 98.41 5.00e-173 600.00
IUUC-Eeu-034804 Erinaceus europaeus 94.27 1.00e-162 565.00
IUUC-Fca-036289 Felis catus 97.77 2.00e-172 597.00
IUUC-Fal-037060 Ficedula albicollis 92.04 3.00e-159 554.00
IUUC-Fox-038051 Fusarium oxysporum 40.34 2.00e-18 86.70
IUUC-Fso-038124 Fusarium solani 57.35 3.00e-19 89.40
IUUC-Gmo-039538 Gadus morhua 81.39 2.00e-147 514.00
IUUC-Ggr-039880 Gaeumannomyces graminis 34.55 3.00e-20 92.80
IUUC-Gga-041108 Gallus gallus 92.36 1.00e-158 552.00
IUUC-Gac-041558 Gasterosteus aculeatus 82.22 6.00e-150 523.00
IUUC-Gma-043969 Glycine max 45.21 4.00e-63 234.00
IUUC-Ggo-045071 Gorilla gorilla 100.00 6.00e-175 606.00
IUUC-Hvu-047451 Hordeum vulgare 44.82 2.00e-58 219.00
IUUC-Itr-048360 Ictidomys tridecemlineatus 98.41 7.00e-173 599.00
IUUC-Kpa-049096 Komagataella pastoris 40.00 7.00e-25 107.00
IUUC-Lch-049726 Latimeria chalumnae 83.12 2.00e-157 548.00
IUUC-Lpe-050734 Leersia perrieri 43.21 4.00e-51 195.00
IUUC-Loc-051983 Lepisosteus oculatus 85.08 1.00e-148 518.00
IUUC-Lma-053038 Leptosphaeria maculans 38.61 1.00e-30 127.00
IUUC-Laf-054510 Loxodonta africana 87.74 2.00e-158 551.00
IUUC-Mcc-054792 Macaca mulatta 99.04 8.00e-174 602.00
IUUC-Meu-055965 Macropus eugenii 83.44 1.00e-138 486.00
IUUC-Mor-057292 Magnaporthe oryzae 30.61 1.00e-37 150.00
IUUC-Mtr-058282 Medicago truncatula 45.79 1.00e-64 239.00
IUUC-Mla-059144 Melampsora laricipopulina 64.10 3.00e-26 112.00
IUUC-Mga-059509 Meleagris gallopavo 91.72 2.00e-158 551.00
IUUC-Mvi-060281 Microbotryum violaceum 35.83 3.00e-47 182.00
IUUC-Mmr-061788 Microcebus murinus 97.45 2.00e-171 594.00
IUUC-Mdo-062922 Monodelphis domestica 95.22 2.00e-168 584.00
IUUC-Mmu-064249 Mus musculus 97.45 3.00e-172 597.00
IUUC-Mac-064843 Musa acuminata 44.74 4.00e-64 238.00
IUUC-Mpu-065717 Mustela putorius furo 97.13 1.00e-167 582.00
IUUC-Mlu-067151 Myotis lucifugus 94.63 2.00e-155 541.00
IUUC-Nfi-068551 Neosartorya fischeri 36.30 4.00e-36 145.00
IUUC-Ncr-068846 Neurospora crassa 34.91 1.00e-34 140.00
IUUC-Nle-069790 Nomascus leucogenys 100.00 6.00e-175 606.00
IUUC-Ont-072517 Oreochromis niloticus 84.71 3.00e-148 517.00
IUUC-Oan-073285 Ornithorhynchus anatinus 88.36 2.00e-103 367.00
IUUC-Ocu-074695 Oryctolagus cuniculus 98.41 3.00e-173 600.00
IUUC-Oba-075515 Oryza barthii 44.52 1.00e-63 236.00
IUUC-Obr-076787 Oryza brachyantha 45.39 6.00e-63 234.00
IUUC-Ogl-077440 Oryza glaberrima 43.35 6.00e-64 237.00
IUUC-Ogu-078294 Oryza glumaepatula 44.52 1.00e-63 236.00
IUUC-Oin-079452 Oryza indica 44.95 7.00e-64 237.00
IUUC-Olo-080450 Oryza longistaminata 44.67 2.00e-62 232.00
IUUC-Ome-081514 Oryza meridionalis 44.52 2.00e-63 236.00
IUUC-Oni-082677 Oryza nivara 44.95 7.00e-64 237.00
IUUC-Opu-083925 Oryza punctata 45.45 2.00e-63 235.00
IUUC-Oru-084828 Oryza rufipogon 45.00 7.00e-63 234.00
IUUC-Osa-085937 Oryza sativa 44.95 7.00e-64 237.00
IUUC-Ola-086559 Oryzias latipes 78.28 9.00e-92 329.00
IUUC-Olu-087766 Ostreococcus lucimarinus 41.48 2.00e-58 218.00
IUUC-Oga-087983 Otolemur garnettii 96.51 2.00e-170 591.00
IUUC-Oar-089281 Ovis aries 97.77 1.00e-172 598.00
IUUC-Ptr-090983 Pan troglodytes 100.00 6.00e-175 606.00
IUUC-Pan-092457 Papio anubis 98.73 2.00e-173 600.00
IUUC-Psi-094046 Pelodiscus sinensis 87.93 7.00e-146 509.00
IUUC-Pno-094925 Phaeosphaeria nodorum 34.78 1.00e-30 127.00
IUUC-Ppa-095487 Physcomitrella patens 44.08 8.00e-64 237.00
IUUC-Pfo-096968 Poecilia formosa 84.81 2.00e-149 521.00
IUUC-Pab-098621 Pongo abelii 99.36 3.00e-172 597.00
IUUC-Pop-100007 Populus trichocarpa 47.14 8.00e-65 240.00
IUUC-Pca-100590 Procavia capensis 78.66 3.00e-133 468.00
IUUC-Ppe-101657 Prunus persica 45.95 2.00e-63 235.00
IUUC-Pva-102446 Pteropus vampyrus 97.77 2.00e-172 598.00
IUUC-Pgr-103604 Puccinia graminis 58.33 6.00e-26 112.00
IUUC-Ptt-103941 Puccinia triticina 59.76 7.00e-26 111.00
IUUC-Pte-104252 Pyrenophora teres 39.23 4.00e-32 132.00
IUUC-Pyt-104556 Pyrenophora triticirepentis 54.67 2.00e-17 83.20
IUUC-Rno-106025 Rattus norvegicus 97.13 4.00e-172 597.00
IUUC-Sce-106172 Saccharomyces cerevisiae 34.26 3.00e-38 152.00
IUUC-Sha-106858 Sarcophilus harrisii 94.90 3.00e-167 580.00
IUUC-Sja-107905 Schizosaccharomyces japonicus 47.83 1.00e-27 116.00
IUUC-Spo-108185 Schizosaccharomyces pombe 45.00 3.00e-19 89.00
IUUC-Smo-108883 Selaginella moellendorffii 42.62 7.00e-56 210.00
IUUC-Sit-110512 Setaria italica 44.93 4.00e-60 224.00
IUUC-Sly-111238 Solanum lycopersicum 45.71 1.00e-67 249.00
IUUC-Stu-112441 Solanum tuberosum 46.03 2.00e-68 252.00
IUUC-Sar-113039 Sorex araneus 83.33 3.00e-121 427.00
IUUC-Sbi-113776 Sorghum bicolor 45.55 1.00e-58 219.00
IUUC-Sre-115074 Sporisorium reilianum 52.94 4.00e-22 99.40
IUUC-Ssc-115262 Sus scrofa 98.41 9.00e-173 599.00
IUUC-Tgu-116790 Taeniopygia guttata 92.04 6.00e-159 553.00
IUUC-Tru-118160 Takifugu rubripes 79.11 1.00e-143 502.00
IUUC-Tsy-119145 Tarsius syrichta 78.66 5.00e-127 447.00
IUUC-Tni-119937 Tetraodon nigroviridis 76.51 7.00e-139 486.00
IUUC-Tca-121323 Theobroma cacao 47.12 6.00e-63 234.00
IUUC-Tre-121993 Trichoderma reesei 45.63 7.00e-20 91.70
IUUC-Tvi-122332 Trichoderma virens 45.63 5.00e-20 92.00
IUUC-Tae-124391 Triticum aestivum 45.15 2.00e-59 222.00
IUUC-Tur-126679 Triticum urartu 45.15 2.00e-58 219.00
IUUC-Tme-127159 Tuber melanosporum 38.24 1.00e-11 63.50
IUUC-Ttr-128261 Tursiops truncatus 97.59 2.00e-158 551.00
IUUC-Uma-129572 Ustilago maydis 40.58 1.00e-22 101.00
IUUC-Vda-129966 Verticillium dahliae 31.08 5.00e-38 151.00
IUUC-Vpa-130698 Vicugna pacos 85.40 9.00e-151 526.00
IUUC-Xtr-132878 Xenopus tropicalis 84.44 1.00e-154 538.00
IUUC-Xma-134017 Xiphophorus maculatus 84.49 2.00e-149 521.00
IUUC-Yli-134373 Yarrowia lipolytica 35.92 7.00e-20 91.30
IUUC-Zma-135222 Zea mays 44.16 5.00e-61 228.00
Created Date 25-Jun-2017

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