iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Ogl-077751

UUCD1 version

UUC-OrG-02035

Ensembl Protein ID

ORGLA08G0087600.1

UniProt Accession

I1QHH5; I1QHH5_ORYGL

Protein Name

Eukaryotic translation initiation factor 3 subunit I

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ORGLA08G0087600	ORGLA08G0087600.1	ORGLA08G0087600.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	6.00e-26	90.1	50	87
UBD/Beta-Prp	1.50e-41	143.2	6	254

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvll 36
           gH++ v++++   d t+l++Gs D t k+WD+ tg+ l
   Q: 50   GHNGAVWSCDVsRDsTRLITGSADQTAKLWDVQTGREL 87
           8***********777*******************9876 PP

UBD/Beta-Prp

   S: 48   lsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqclee........ 131
           ++ghe + t +++++dg++l ++++D+t +vw  ++g+ + t++gh+  v+s+++s+++ +l++Gs+d+t+++wd++tg +l +        
   Q: 6    MKGHERPLTFLRYNRDGDLLFSCAKDHTPNVWFADNGDRLGTYRGHNGAVWSCDVSRDSTRLITGSADQTAKLWDVQTGRELFTfrfdapar 97
           489********************************************************************************9******** PP
   S: 132  ...........................................tlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtl...tg 177
                                                      + +g +g +n +v+ p ++ +++++ D t+r+Wd +tg++l++    + 
   Q: 98   svefaigdglavittdnfmenvptaqvkriaedpddqseesllVITGIKGRINRAVWGPLNRTIITAGEDATIRIWDTETGQCLKESdkeQ- 188
           ****************************************************************************************955. PP
   S: 178  ghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgs.sD 243
           gh++ ++sls + +  ++++gsld++ klwd +t + ++t+    ++v+ v+ sp  +++v g+ +D
   Q: 189  GHQKTITSLSKSADWSHFLTGSLDKSAKLWDTRTLTLIKTYVTE-RPVNAVDISPLLDHVVIGGgQD 254
           5***************************************9875.4666666665444444443144 PP

Organism

Oryza glaberrima

Functional Description
(View)

Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation.

Protein Sequence
(Fasta)

MRPILMKGHE RPLTFLRYNR DGDLLFSCAK DHTPNVWFAD NGDRLGTYRG HNGAVWSCDV 60
SRDSTRLITG SADQTAKLWD VQTGRELFTF RFDAPARSVE FAIGDGLAVI TTDNFMENVP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAGGCCGA TCCTGATGAA GGGGCACGAG CGCCCGCTCA CGTTCCTCCG GTACAACCGC 60
GACGGGGACC TCCTCTTCTC CTGCGCCAAG GACCACACCC CCAACGTCTG GTTCGCCGAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0963--Cytoplasm
KW-0396--Initiation factor
KW-0648--Protein biosynthesis
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR027525--eIF3i
IPR020472--G-protein_beta_WD-40_rep
IPR002469--Peptidase_S9B_N
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0016282--C:eukaryotic 43S preinitiation complex
GO:0033290--C:eukaryotic 48S preinitiation complex
GO:0005852--C:eukaryotic translation initiation factor 3 complex
GO:0003743--F:translation initiation factor activity
GO:0001731--P:formation of translation preinitiation complex
GO:0006446--P:regulation of translational initiation

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000115	Aegilops tauschii	68.93	7.00e-65	240.00
IUUC-Atr-002468	Amborella trichopoda	72.84	2.00e-98	350.00
IUUC-Aly-005473	Arabidopsis lyrata	78.35	6.00e-155	538.00
IUUC-Ath-007094	Arabidopsis thaliana	77.13	9.00e-153	531.00
IUUC-Ago-008000	Ashbya gossypii	42.17	9.00e-74	269.00
IUUC-Acl-008098	Aspergillus clavatus	45.02	2.00e-79	288.00
IUUC-Afl-008494	Aspergillus flavus	45.87	7.00e-83	299.00
IUUC-Aor-010114	Aspergillus oryzae	45.87	7.00e-83	299.00
IUUC-Bci-013950	Botrytis cinerea	46.18	1.00e-82	298.00
IUUC-Bdi-015019	Brachypodium distachyon	89.88	2.00e-176	610.00
IUUC-Bol-015709	Brassica oleracea	77.88	7.00e-155	539.00
IUUC-Bra-017760	Brassica rapa	77.88	4.00e-156	543.00
IUUC-Cre-022952	Chlamydomonas reinhardtii	52.76	7.00e-103	365.00
IUUC-Cin-025597	Ciona intestinalis	48.16	8.00e-91	325.00
IUUC-Cne-026838	Cryptococcus neoformans	43.16	1.00e-78	285.00
IUUC-Cme-027304	Cyanidioschyzon merolae	53.40	4.00e-91	327.00
IUUC-Dre-028567	Danio rerio	45.40	7.00e-88	316.00
IUUC-Dse-031191	Dothistroma septosporum	43.77	1.00e-79	288.00
IUUC-Dme-031879	Drosophila melanogaster	48.30	6.00e-90	323.00
IUUC-Fso-038188	Fusarium solani	44.92	7.00e-79	286.00
IUUC-Gmo-039311	Gadus morhua	44.92	1.00e-85	308.00
IUUC-Ggr-040045	Gaeumannomyces graminis	45.85	2.00e-80	291.00
IUUC-Gac-042086	Gasterosteus aculeatus	45.71	5.00e-85	306.00
IUUC-Gma-043246	Glycine max	83.44	1.00e-164	571.00
IUUC-Hvu-047553	Hordeum vulgare	90.18	2.00e-177	613.00
IUUC-Kpa-049325	Komagataella pastoris	45.57	2.00e-80	291.00
IUUC-Lch-049620	Latimeria chalumnae	45.51	1.00e-78	285.00
IUUC-Lpe-051338	Leersia perrieri	93.89	5.00e-177	612.00
IUUC-Lma-053047	Leptosphaeria maculans	46.93	2.00e-84	305.00
IUUC-Mor-057025	Magnaporthe oryzae	45.23	3.00e-78	284.00
IUUC-Mpo-057511	Magnaporthe poae	47.55	9.00e-81	292.00
IUUC-Mtr-058051	Medicago truncatula	83.13	1.00e-164	571.00
IUUC-Mla-059061	Melampsora laricipopulina	43.87	8.00e-80	289.00
IUUC-Mvi-060399	Microbotryum violaceum	43.45	1.00e-76	278.00
IUUC-Mac-065520	Musa acuminata	82.87	2.00e-162	563.00
IUUC-Ncr-068820	Neurospora crassa	46.60	3.00e-80	291.00
IUUC-Ont-071765	Oreochromis niloticus	46.01	4.00e-88	317.00
IUUC-Oba-075395	Oryza barthii	91.10	3.00e-173	599.00
IUUC-Obr-076334	Oryza brachyantha	93.56	0.00e+00	627.00
IUUC-Olo-080677	Oryza longistaminata	85.79	0.00e+00	644.00
IUUC-Oni-082411	Oryza nivara	88.04	2.00e-165	573.00
IUUC-Opu-083136	Oryza punctata	99.69	0.00e+00	672.00
IUUC-Oru-084916	Oryza rufipogon	95.22	0.00e+00	654.00
IUUC-Osa-085776	Oryza sativa	100.00	0.00e+00	674.00
IUUC-Ola-087053	Oryzias latipes	46.01	5.00e-87	313.00
IUUC-Olu-087602	Ostreococcus lucimarinus	60.43	4.00e-116	410.00
IUUC-Ptr-091124	Pan troglodytes	37.00	2.00e-57	215.00
IUUC-Ppa-095949	Physcomitrella patens	76.07	1.00e-151	528.00
IUUC-Pfo-096101	Poecilia formosa	45.09	9.00e-87	312.00
IUUC-Pop-099617	Populus trichocarpa	79.45	6.00e-158	548.00
IUUC-Ppe-101320	Prunus persica	82.52	8.00e-163	565.00
IUUC-Pva-102789	Pteropus vampyrus	42.64	8.00e-74	269.00
IUUC-Pgr-103479	Puccinia graminis	44.17	2.00e-80	291.00
IUUC-Ptt-103981	Puccinia triticina	44.17	4.00e-81	293.00
IUUC-Pte-104278	Pyrenophora teres	45.54	2.00e-81	294.00
IUUC-Pyt-104492	Pyrenophora triticirepentis	45.54	2.00e-81	294.00
IUUC-Spo-108314	Schizosaccharomyces pombe	46.32	7.00e-88	316.00
IUUC-Ssl-108478	Sclerotinia sclerotiorum	45.87	2.00e-82	298.00
IUUC-Smo-108728	Selaginella moellendorffii	73.23	9.00e-145	505.00
IUUC-Sit-110801	Setaria italica	92.02	0.00e+00	627.00
IUUC-Sly-111326	Solanum lycopersicum	79.14	5.00e-157	546.00
IUUC-Stu-112458	Solanum tuberosum	80.98	5.00e-159	552.00
IUUC-Sbi-114063	Sorghum bicolor	90.18	8.00e-179	618.00
IUUC-Tru-118766	Takifugu rubripes	45.97	4.00e-87	313.00
IUUC-Tni-120197	Tetraodon nigroviridis	45.71	2.00e-87	315.00
IUUC-Tca-121316	Theobroma cacao	83.44	1.00e-163	567.00
IUUC-Tae-125800	Triticum aestivum	89.88	1.00e-176	610.00
IUUC-Tur-126334	Triticum urartu	79.75	2.00e-150	523.00
IUUC-Tme-127038	Tuber melanosporum	45.87	3.00e-84	303.00
IUUC-Ttr-128659	Tursiops truncatus	43.25	2.00e-66	245.00
IUUC-Vvi-131076	Vitis vinifera	81.60	4.00e-163	566.00
IUUC-Xma-133383	Xiphophorus maculatus	45.09	2.00e-86	311.00
IUUC-Yli-134586	Yarrowia lipolytica	44.55	5.00e-69	253.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence