iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Pop-099218

Ensembl Protein ID

POPTR_0013s03870.1

UniProt Accession

B9I5F9; B9I5F9_POPTR

Genbank Protein ID

EEE94998.1

Protein Name

Auxin-responsive protein

Genbank Nucleotide ID

CM000349

Gene Name

POPTRDRAFT_814326; POPTR_0013s03870g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0013s03870	POPTR_0013s03870.1	POPTR_0013s03870.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
ULD/UDP/UFD/PB1	3.30e-16	60.4	130	227

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UDP/UFD/PB1

   S: 3    rvkvsykgeirsfaldlekpgkfedLlkavrt.lt.......................elknsevalkYeDedGDlvtlksDedldkavsl 69
           +vkvs++g+++++++dl+ + ++++L +a+ + +                         l++s++ ++YeD+dGD++ l++D++++++v+ 
   Q: 130  FVKVSMDGAPYLRKVDLKLYKSYQELSDALGKmFSsftigncgsqgmkdfmnesklidLLNGSDYVPTYEDKDGDWM-LVGDVPWEMFVD- 218
           8*******************************6225669999***************99999***************.************. PP
   S: 70   laskksllrlliqk 83
                s++rl+i+k
   Q: 219  -----SCKRLRIMK 227
           .....********8 PP

Organism

Populus trichocarpa

Functional Description
(View)

Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations.

Protein Sequence
(Fasta)

MTSIMGAEPE KYSMINFEET ELRLGLPGGI GNGNDGEVAK SNGKRGFSET VDLKLNLSTK 60
ESGKGGDEEK VMKEKTVAPP ASTDPAKPPA KAQVVGWPPI RSFRKNVMAV QKNSNDNGEK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCACTACTAT TCTTCAACCT TTATTACATG TGCATACCAT AAATCTCTCT ACATCAAGAT 60
AATTAGTAGC AAGAAATTAA CATCAACAAG AAGAAAAGAG AGAGAGAGAG AGAGGGGATA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0927--Auxin signaling pathway
KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0678--Repressor
KW-0804--Transcription
KW-0805--Transcription regulation

Interpro

IPR033389--AUX/IAA_dom
IPR003311--AUX_IAA
IPR000270--PB1_dom

PROSITE

PS51745--PB1

Pfam

PF02309--AUX_IAA

Gene Ontology

GO:0005634--C:nucleus
GO:0009734--P:auxin-activated signaling pathway
GO:0006355--P:regulation of transcription, DNA-templated
GO:0006351--P:transcription, DNA-templated

KEGG

pop:POPTR_0013s03870g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000264	Aegilops tauschii	59.63	5.00e-50	189.00
IUUC-Atr-002559	Amborella trichopoda	64.61	1.00e-84	305.00
IUUC-Aly-006188	Arabidopsis lyrata	68.02	9.00e-77	278.00
IUUC-Ath-007356	Arabidopsis thaliana	67.74	3.00e-82	297.00
IUUC-Bol-016371	Brassica oleracea	69.17	4.00e-82	296.00
IUUC-Bra-016936	Brassica rapa	69.01	3.00e-81	293.00
IUUC-Gma-043010	Glycine max	71.37	4.00e-89	320.00
IUUC-Hvu-047087	Hordeum vulgare	76.10	6.00e-68	248.00
IUUC-Mtr-058641	Medicago truncatula	69.70	1.00e-93	335.00
IUUC-Mac-064520	Musa acuminata	69.30	5.00e-79	286.00
IUUC-Obr-076745	Oryza brachyantha	59.14	7.00e-71	259.00
IUUC-Ogl-077429	Oryza glaberrima	55.91	4.00e-65	240.00
IUUC-Ogu-078911	Oryza glumaepatula	58.70	7.00e-73	266.00
IUUC-Ome-081785	Oryza meridionalis	57.65	2.00e-46	178.00
IUUC-Opu-083338	Oryza punctata	53.27	3.00e-48	184.00
IUUC-Oru-084731	Oryza rufipogon	60.49	2.00e-46	178.00
IUUC-Pte-104322	Pyrenophora teres	29.03	7.10e-01	29.60
IUUC-Sit-110063	Setaria italica	62.31	8.00e-79	286.00
IUUC-Sly-111769	Solanum lycopersicum	75.89	1.00e-104	371.00
IUUC-Stu-112038	Solanum tuberosum	76.10	5.00e-99	353.00
IUUC-Sbi-114725	Sorghum bicolor	76.02	5.00e-71	260.00
IUUC-Tca-121532	Theobroma cacao	84.46	2.00e-113	400.00
IUUC-Tur-126762	Triticum urartu	57.03	2.00e-66	244.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence