iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Stu-112038

Ensembl Protein ID

PGSC0003DMT400050101

UniProt Accession

M1BPS3; M1BPS3_SOLTU

Protein Name

Auxin-responsive protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PGSC0003DMG402019457	PGSC0003DMT400050101	PGSC0003DMT400050101

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
ULD/UDP/UFD/PB1	1.10e-15	58.8	133	230

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UDP/UFD/PB1

   S: 3    rvkvsykgeirsfaldlekpgkfedLlkavrt.lt.......................elknsevalkYeDedGDlvtlksDedldkav 67
           +vkvs +g+++++++dl+ + +++ L +a+ + +                         l++s++ ++YeD+dGD++ l++D++++++v
   Q: 133  FVKVSVDGAPYLRKVDLKMYKSYQQLSDALGKmFSsftigncgtqgfkdfmnesklidLLNGSDYVPTYEDKDGDWM-LVGDVPWEMFV 220
           8*******************************6225568999***************99999***************.*********** PP
   S: 68   sllaskksllrlliqk 83
           +      s++rl+i+k
   Q: 221  D------SCKRLRIMK 230
           *......********8 PP

Organism

Solanum tuberosum

Functional Description
(View)

Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations.

Protein Sequence
(Fasta)

MTSVLGAECD KIRLDYEAET ELRLGLPGAN GNEVESTNKN NGKRVFSETV DLKLNLSNSK 60
DSTLMDNINQ VDNMKEKKNN IVVPSSNDPA KPPAKAQVVG WPPVRSFRKN VMTVQKNTTG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCTTATTATA CCCTTCTTCT TACACTTTCA TATTCACCTT TAAAAAAACT TCAAAAACAC 60
CCAAAAAAAA AACAAAGAGG AAAAAAAAAA GAAAATTATA TTTATCGTTA ATCTGAAGGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0927--Auxin signaling pathway
KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0678--Repressor
KW-0804--Transcription
KW-0805--Transcription regulation

Interpro

IPR033389--AUX/IAA_dom
IPR003311--AUX_IAA
IPR000270--PB1_dom

PROSITE

PS51745--PB1

Pfam

PF02309--AUX_IAA

Gene Ontology

GO:0005634--C:nucleus
GO:0009734--P:auxin-activated signaling pathway
GO:0006355--P:regulation of transcription, DNA-templated
GO:0006351--P:transcription, DNA-templated

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000264	Aegilops tauschii	61.11	4.00e-51	192.00
IUUC-Atr-002559	Amborella trichopoda	64.92	8.00e-80	288.00
IUUC-Aly-006188	Arabidopsis lyrata	67.46	1.00e-76	278.00
IUUC-Ath-007356	Arabidopsis thaliana	67.86	5.00e-82	295.00
IUUC-Acl-008330	Aspergillus clavatus	29.41	1.10e+00	27.70
IUUC-Bdi-014859	Brachypodium distachyon	55.31	3.00e-71	260.00
IUUC-Bol-016371	Brassica oleracea	70.04	1.00e-81	294.00
IUUC-Bra-016936	Brassica rapa	68.15	2.00e-79	287.00
IUUC-Gma-043010	Glycine max	68.64	1.00e-85	308.00
IUUC-Hvu-047087	Hordeum vulgare	77.36	3.00e-68	249.00
IUUC-Meu-056725	Macropus eugenii	25.00	5.70e-01	27.30
IUUC-Mtr-058641	Medicago truncatula	68.36	1.00e-87	314.00
IUUC-Mla-059154	Melampsora laricipopulina	30.12	9.80e-02	32.00
IUUC-Ont-072310	Oreochromis niloticus	29.55	4.10e-01	28.10
IUUC-Oan-073018	Ornithorhynchus anatinus	25.00	6.70e-01	27.30
IUUC-Oba-075945	Oryza barthii	72.57	2.00e-68	251.00
IUUC-Obr-076745	Oryza brachyantha	57.65	6.00e-68	249.00
IUUC-Ogl-077429	Oryza glaberrima	53.85	3.00e-64	236.00
IUUC-Ogu-078911	Oryza glumaepatula	56.12	4.00e-72	263.00
IUUC-Oin-079136	Oryza indica	72.57	2.00e-68	250.00
IUUC-Olo-080519	Oryza longistaminata	58.39	2.00e-44	170.00
IUUC-Ome-081785	Oryza meridionalis	58.18	2.00e-47	181.00
IUUC-Oni-082674	Oryza nivara	72.57	2.00e-68	250.00
IUUC-Opu-083338	Oryza punctata	62.58	3.00e-47	180.00
IUUC-Oru-084731	Oryza rufipogon	52.31	1.00e-47	181.00
IUUC-Osa-086164	Oryza sativa	72.57	2.00e-68	250.00
IUUC-Pop-099218	Populus trichocarpa	76.80	1.00e-99	354.00
IUUC-Sit-110063	Setaria italica	59.92	1.00e-76	278.00
IUUC-Sly-111769	Solanum lycopersicum	98.01	3.00e-144	502.00
IUUC-Sbi-114725	Sorghum bicolor	75.00	6.00e-71	259.00
IUUC-Tca-121532	Theobroma cacao	74.61	2.00e-101	360.00
IUUC-Tae-122725	Triticum aestivum	76.83	6.00e-68	249.00
IUUC-Tur-126762	Triticum urartu	55.74	3.00e-62	230.00
IUUC-Vvi-131458	Vitis vinifera	68.40	4.00e-88	316.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence