iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ola-087154

Ensembl Protein ID

ENSORLP00000015621.1

UniProt Accession

H2MAR1; H2MAR1_ORYLA

Genbank Protein ID

ENSORLP00000015621

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

BAAF04048883

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSORLG00000012477.1	ENSORLT00000015622.1	ENSORLP00000015621.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	2.40e-08	34.3	377	422

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 2    kvClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCrs 53
           ++C vC++gge    ++ C+ C +++H  Cl +   e+ p+ + w Cp C s
   Q: 377  DYCEVCQQGGE----IILCDTCPRAYHMVCLDPD-MEKAPEGK-WSCPHCVS 422
           79*********....9******************.999****7.******86 PP

Organism

Oryzias latipes

Protein Sequence
(Fasta)

FSSRAACSSS SSGGCLTLTN ACVAPADEDE PEDAVSDVEE VPKSKKKKKA KKSSRESRSS 60
KRQRPVREEL PVSSPENLIG IDVGEGDADE FGVRSESEGS DYAPGKKKKK RSSSAKDKKK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTTTCCTCCC GCGCGGCCTG CAGCAGCAGC AGCAGCGGTG GCTGCCTGAC CCTCACTAAC 60
GCATGTGTGG CTCCGGCAGA TGAGGATGAG CCGGAAGATG CTGTGTCTGA CGTAGAGGAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR028725--CHD4
IPR012957--CHD_C2
IPR012958--CHD_N
IPR000953--Chromo/chromo_shadow_dom
IPR023780--Chromo_domain
IPR016197--Chromodomain-like
IPR002464--DNA/RNA_helicase_DEAH_CS
IPR009462--DUF1086
IPR009463--DUF1087
IPR014001--Helicase_ATP-bd
IPR001650--Helicase_C
IPR009071--HMG_box_dom
IPR027417--P-loop_NTPase
IPR000330--SNF2_N
IPR019786--Zinc_finger_PHD-type_CS
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50013--CHROMO_2
PS00690--DEAH_ATP_HELICASE
PS51192--HELICASE_ATP_BIND_1
PS51194--HELICASE_CTER
PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF08074--CHDCT2
PF08073--CHDNT
PF00385--Chromo
PF06461--DUF1086
PF06465--DUF1087
PF00271--Helicase_C
PF00628--PHD
PF00176--SNF2_N

SMART

SM00298--CHROMO
SM00487--DEXDc
SM01146--DUF1086
SM01147--DUF1087
SM00490--HELICc
SM00249--PHD

Gene Ontology

GO:0016581--C:NuRD complex
GO:0005524--F:ATP binding
GO:0008026--F:ATP-dependent helicase activity
GO:0003677--F:DNA binding
GO:0008270--F:zinc ion binding
GO:0006325--P:chromatin organization
GO:0006355--P:regulation of transcription, DNA-templated
GO:0051225--P:spindle assembly

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Acl-008050	Aspergillus clavatus	32.03	3.00e-73	270.00
IUUC-Afl-008677	Aspergillus flavus	32.70	4.00e-71	263.00
IUUC-Afu-008975	Aspergillus fumigatus	31.51	1.00e-71	265.00
IUUC-Ani-009464	Aspergillus nidulans	32.32	5.00e-68	253.00
IUUC-Ang-009516	Aspergillus niger	31.99	2.00e-65	244.00
IUUC-Aor-010057	Aspergillus oryzae	32.34	2.00e-71	264.00
IUUC-Ate-010307	Aspergillus terreus	32.27	3.00e-68	253.00
IUUC-Bgr-012211	Blumeria graminis	33.66	2.00e-70	260.00
IUUC-Bci-013603	Botrytis cinerea	31.48	1.00e-69	258.00
IUUC-Fox-037667	Fusarium oxysporum	31.83	5.00e-63	236.00
IUUC-Fso-038331	Fusarium solani	32.01	9.00e-60	225.00
IUUC-Mor-057145	Magnaporthe oryzae	33.15	9.00e-73	268.00
IUUC-Mpo-057493	Magnaporthe poae	32.40	5.00e-69	256.00
IUUC-Mtr-057734	Medicago truncatula	32.49	1.00e-70	261.00
IUUC-Mlu-067785	Myotis lucifugus	74.33	0.00e+00	2298.00
IUUC-Nfi-068617	Neosartorya fischeri	32.02	1.00e-72	268.00
IUUC-Ont-072279	Oreochromis niloticus	88.51	0.00e+00	2275.00
IUUC-Oba-075626	Oryza barthii	34.05	2.00e-71	264.00
IUUC-Ogl-077187	Oryza glaberrima	33.86	2.00e-70	261.00
IUUC-Oin-079268	Oryza indica	33.86	4.00e-70	259.00
IUUC-Olo-080567	Oryza longistaminata	33.12	4.00e-61	229.00
IUUC-Oni-082122	Oryza nivara	33.86	1.00e-70	261.00
IUUC-Oru-084783	Oryza rufipogon	33.86	1.00e-70	261.00
IUUC-Osa-086206	Oryza sativa	33.86	9.00e-70	258.00
IUUC-Pte-104217	Pyrenophora teres	31.97	2.00e-68	254.00
IUUC-Pyt-104797	Pyrenophora triticirepentis	31.77	3.00e-68	253.00
IUUC-Ssl-108500	Sclerotinia sclerotiorum	32.34	4.00e-71	263.00
IUUC-Tru-118530	Takifugu rubripes	86.32	0.00e+00	2246.00
IUUC-Tsy-119261	Tarsius syrichta	70.55	0.00e+00	1729.00
IUUC-Tni-120764	Tetraodon nigroviridis	83.21	0.00e+00	2671.00
IUUC-Tca-121065	Theobroma cacao	32.83	2.00e-69	258.00
IUUC-Tvi-122455	Trichoderma virens	33.20	7.00e-65	242.00
IUUC-Vda-129884	Verticillium dahliae	32.95	3.00e-75	276.00
IUUC-Xma-133226	Xiphophorus maculatus	90.34	0.00e+00	2166.00
IUUC-Yli-134344	Yarrowia lipolytica	32.90	1.00e-71	265.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence