iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Aly-006465

Ensembl Protein ID

scaffold_302129.1

UniProt Accession

D7L7Z2; D7L7Z2_ARALL

Genbank Protein ID

EFH59364.1

Protein Name

Transducin family protein

Genbank Nucleotide ID

GL348715

Gene Name

ARALYDRAFT_898159

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
scaffold_302129.1	scaffold_302129.1	scaffold_302129.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	6.10e-33	112.1	230	263
UBD/Beta-Prp	8.80e-64	216.2	50	308

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrt 32
           gH++s++++++ +d   +++ s D++ kvWD+++
   Q: 230  GHKGSIYAVSWsPDgQQVLTVSADKSAKVWDISD 263
           8***********9999***************765 PP

UBD/Beta-Prp

   S: 4    tlkghhksvitcvkfspdksllatgsrdgtikvwdvttgkllrsl.sgheaevtavkfspdgkilvtgseD....rtikvwdlstgkcvhtl 90
           ++ g+h  + t+  +sp+++++a+g  +gt+++w + +  +l++  +   + + ++++s dg +++ +s D     +++ +  ++g+ v  +
   Q: 50   SIYGEHAYPATVARYSPNGEWIASGDVSGTVRIWGAYNDHVLKKEfKVLAGRIDDLQWSADG-MRIVASGDgkgkSLVRAFMWDSGSNVGEF 140
           5668899999*9**********************98877776555499999**********9.7888888879999**************** PP
   S: 91   kghedsvlslsfspsg.dklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtl..tggh 179
            gh+++vls+++ p++  ++v+ ++d  ++ ++ +  +      ++h+ +vncv++ pdg+ +++ s D++  ++d kt ++l +l    gh
   Q: 141  DGHSRRVLSCAIKPTRpFRIVTCGEDFLVNFYEGPPFKFKL-SSREHSNFVNCVRFAPDGSKFITVSSDKKGIIYDGKTCEILGELssDDGH 231
           **************99899*******************999.9*******************************************88455* PP
   S: 180  tdsvyslsfdsngkelvsgsldgtvklwdlq...tgecvrtlnght.....dnvksvrfspnderlvsgssDgsiriW 249
           ++s+y +s++++g++++++s d++ k+wd++   +g+   tln+       d +++  ++ +++++v++s  g+i+i+
   Q: 232  KGSIYAVSWSPDGQQVLTVSADKSAKVWDISdngSGTLKTTLNCPGssggvDDMLVGCLW-QNDHIVTVSLGGTISIF 308
           ********************************9977777777775544444444444455.78889999999999986 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MELSETYACV PSTERGRGIL ISGDSKSDTI LYTNGRSVVT LDLNNPLKVS IYGEHAYPAT 60
VARYSPNGEW IASGDVSGTV RIWGAYNDHV LKKEFKVLAG RIDDLQWSAD GMRIVASGDG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TCTCTGCAAA GTCCTCTCGA TTTTGATGGA GCTTTCCGAA ACCTATGCTT GCGTTCCATC 60
GACGGAGAGA GGTAGAGGAA TCCTGATCTC CGGTGACTCG AAGTCCGACA CCATCCTCTA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR011045--N2O_reductase_N
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005829--C:cytosol

KEGG

aly:ARALYDRAFT_898159

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000457	Aegilops tauschii	67.74	0.00e+00	718.00
IUUC-Aml-002368	Ailuropoda melanoleuca	36.93	5.00e-109	387.00
IUUC-Atr-003160	Amborella trichopoda	72.46	0.00e+00	923.00
IUUC-Apl-004012	Anas platyrhynchos	39.28	1.00e-111	396.00
IUUC-Aca-004707	Anolis carolinensis	37.72	2.00e-113	402.00
IUUC-Ath-006740	Arabidopsis thaliana	97.04	0.00e+00	1193.00
IUUC-Ago-007920	Ashbya gossypii	27.83	8.00e-67	247.00
IUUC-Acl-008262	Aspergillus clavatus	32.79	5.00e-85	308.00
IUUC-Afl-008471	Aspergillus flavus	30.10	1.00e-70	260.00
IUUC-Afu-008989	Aspergillus fumigatus	32.02	2.00e-76	279.00
IUUC-Ani-009167	Aspergillus nidulans	32.30	7.00e-90	323.00
IUUC-Ang-009595	Aspergillus niger	32.31	1.00e-79	290.00
IUUC-Aor-009908	Aspergillus oryzae	32.20	7.00e-85	307.00
IUUC-Ate-010580	Aspergillus terreus	32.68	2.00e-84	307.00
IUUC-Ame-011269	Astyanax mexicanus	43.68	7.00e-45	174.00
IUUC-Bgr-011996	Blumeria graminis	31.08	8.00e-82	297.00
IUUC-Bta-013278	Bos taurus	36.81	3.00e-113	401.00
IUUC-Bdi-014659	Brachypodium distachyon	64.53	0.00e+00	823.00
IUUC-Bol-016529	Brassica oleracea	91.21	0.00e+00	954.00
IUUC-Bra-017139	Brassica rapa	91.13	0.00e+00	1134.00
IUUC-Cja-019952	Callithrix jacchus	37.24	3.00e-106	378.00
IUUC-Cfa-020225	Canis familiaris	36.75	1.00e-110	392.00
IUUC-Cpo-021900	Cavia porcellus	36.76	1.00e-107	382.00
IUUC-Csa-023028	Chlorocebus sabaeus	37.56	2.00e-106	378.00
IUUC-Cho-025030	Choloepus hoffmanni	30.92	3.00e-67	248.00
IUUC-Cin-025152	Ciona intestinalis	40.08	3.00e-54	204.00
IUUC-Csv-025986	Ciona savignyi	31.28	8.00e-61	227.00
IUUC-Cne-026814	Cryptococcus neoformans	31.33	1.00e-75	276.00
IUUC-Dre-027498	Danio rerio	43.52	7.00e-45	172.00
IUUC-Dno-029383	Dasypus novemcinctus	37.56	9.00e-107	380.00
IUUC-Dor-030633	Dipodomys ordii	36.01	1.00e-96	346.00
IUUC-Dse-031526	Dothistroma septosporum	31.48	7.00e-82	297.00
IUUC-Dme-031597	Drosophila melanogaster	36.60	2.00e-114	405.00
IUUC-Ete-032780	Echinops telfairi	33.67	7.00e-92	330.00
IUUC-Eca-034306	Equus caballus	35.95	4.00e-104	371.00
IUUC-Eeu-034531	Erinaceus europaeus	31.46	5.00e-36	144.00
IUUC-Fca-036301	Felis catus	37.91	2.00e-113	402.00
IUUC-Fal-037361	Ficedula albicollis	38.74	4.00e-119	421.00
IUUC-Fox-037924	Fusarium oxysporum	32.85	4.00e-90	324.00
IUUC-Gmo-039238	Gadus morhua	37.03	2.00e-102	365.00
IUUC-Gga-040235	Gallus gallus	39.02	4.00e-111	394.00
IUUC-Gac-042363	Gasterosteus aculeatus	38.05	1.00e-112	399.00
IUUC-Gma-043218	Glycine max	76.11	0.00e+00	979.00
IUUC-Ggo-044632	Gorilla gorilla	36.04	1.00e-100	359.00
IUUC-Hsa-045792	Homo sapiens	37.89	2.00e-111	395.00
IUUC-Hvu-047517	Hordeum vulgare	66.34	0.00e+00	864.00
IUUC-Itr-048076	Ictidomys tridecemlineatus	37.58	5.00e-110	391.00
IUUC-Kpa-049183	Komagataella pastoris	32.72	4.00e-76	278.00
IUUC-Lch-050428	Latimeria chalumnae	38.70	2.00e-116	412.00
IUUC-Lpe-051306	Leersia perrieri	69.13	0.00e+00	889.00
IUUC-Loc-052096	Lepisosteus oculatus	34.66	8.00e-92	330.00
IUUC-Lma-053313	Leptosphaeria maculans	35.34	6.00e-92	333.00
IUUC-Laf-054060	Loxodonta africana	37.15	6.00e-109	387.00
IUUC-Mcc-055619	Macaca mulatta	36.79	3.00e-102	365.00
IUUC-Meu-056689	Macropus eugenii	35.46	5.00e-66	244.00
IUUC-Mor-056940	Magnaporthe oryzae	32.15	2.00e-80	292.00
IUUC-Mtr-057922	Medicago truncatula	75.49	0.00e+00	962.00
IUUC-Mla-059103	Melampsora laricipopulina	31.42	2.00e-71	263.00
IUUC-Mga-060150	Meleagris gallopavo	39.25	3.00e-111	395.00
IUUC-Mvi-060448	Microbotryum violaceum	28.76	4.00e-59	221.00
IUUC-Mmr-061226	Microcebus murinus	36.99	5.00e-105	374.00
IUUC-Mdo-062674	Monodelphis domestica	37.40	5.00e-113	400.00
IUUC-Mmu-064170	Mus musculus	36.91	2.00e-108	385.00
IUUC-Mac-065124	Musa acuminata	72.70	0.00e+00	942.00
IUUC-Mpu-066001	Mustela putorius furo	35.89	1.00e-106	379.00
IUUC-Mlu-067253	Myotis lucifugus	37.42	3.00e-107	382.00
IUUC-Nfi-068550	Neosartorya fischeri	32.14	2.00e-86	312.00
IUUC-Nle-070115	Nomascus leucogenys	36.00	6.00e-95	340.00
IUUC-Opr-070254	Ochotona princeps	36.76	7.00e-101	360.00
IUUC-Ont-071666	Oreochromis niloticus	40.00	4.00e-110	391.00
IUUC-Oan-073292	Ornithorhynchus anatinus	46.76	3.00e-35	139.00
IUUC-Ocu-074824	Oryctolagus cuniculus	36.32	4.00e-101	361.00
IUUC-Oba-075010	Oryza barthii	67.82	0.00e+00	880.00
IUUC-Obr-076364	Oryza brachyantha	68.14	0.00e+00	873.00
IUUC-Ogl-077019	Oryza glaberrima	67.82	0.00e+00	880.00
IUUC-Ogu-078496	Oryza glumaepatula	67.82	0.00e+00	880.00
IUUC-Oin-080116	Oryza indica	67.65	0.00e+00	878.00
IUUC-Olo-080290	Oryza longistaminata	67.98	0.00e+00	882.00
IUUC-Ome-081969	Oryza meridionalis	67.65	0.00e+00	879.00
IUUC-Oni-082075	Oryza nivara	67.82	0.00e+00	881.00
IUUC-Opu-083959	Oryza punctata	67.82	0.00e+00	875.00
IUUC-Oru-084711	Oryza rufipogon	67.82	0.00e+00	880.00
IUUC-Osa-085958	Oryza sativa	67.65	0.00e+00	878.00
IUUC-Ola-086968	Oryzias latipes	37.62	2.00e-112	399.00
IUUC-Oga-089108	Otolemur garnettii	37.10	2.00e-110	392.00
IUUC-Oar-089986	Ovis aries	34.41	1.00e-98	353.00
IUUC-Ptr-091281	Pan troglodytes	37.91	1.00e-110	392.00
IUUC-Pan-092585	Papio anubis	37.56	2.00e-106	379.00
IUUC-Psi-093811	Pelodiscus sinensis	37.34	1.00e-112	399.00
IUUC-Pma-094396	Petromyzon marinus	35.96	9.00e-110	390.00
IUUC-Pno-095086	Phaeosphaeria nodorum	32.80	9.00e-86	310.00
IUUC-Ppa-095876	Physcomitrella patens	56.34	0.00e+00	719.00
IUUC-Pfo-096973	Poecilia formosa	39.19	1.00e-121	429.00
IUUC-Pab-098391	Pongo abelii	37.56	2.00e-106	379.00
IUUC-Pop-098850	Populus trichocarpa	80.43	0.00e+00	1018.00
IUUC-Pca-100257	Procavia capensis	56.25	4.00e-24	105.00
IUUC-Ppe-101578	Prunus persica	77.30	0.00e+00	987.00
IUUC-Pva-102872	Pteropus vampyrus	35.39	4.00e-105	374.00
IUUC-Pgr-103593	Puccinia graminis	30.77	4.00e-70	258.00
IUUC-Pyt-104689	Pyrenophora triticirepentis	32.68	4.00e-86	311.00
IUUC-Rno-105737	Rattus norvegicus	36.91	3.00e-112	398.00
IUUC-Sha-107084	Sarcophilus harrisii	36.47	2.00e-91	329.00
IUUC-Sja-107688	Schizosaccharomyces japonicus	32.89	2.00e-89	322.00
IUUC-Spo-108309	Schizosaccharomyces pombe	33.33	2.00e-84	305.00
IUUC-Smo-109255	Selaginella moellendorffii	53.19	0.00e+00	650.00
IUUC-Sit-109962	Setaria italica	67.98	0.00e+00	884.00
IUUC-Sly-110897	Solanum lycopersicum	76.15	0.00e+00	972.00
IUUC-Stu-111971	Solanum tuberosum	76.64	0.00e+00	977.00
IUUC-Sbi-114857	Sorghum bicolor	68.64	0.00e+00	884.00
IUUC-Tgu-117256	Taeniopygia guttata	39.09	8.00e-120	423.00
IUUC-Tru-117871	Takifugu rubripes	37.30	6.00e-111	394.00
IUUC-Tsy-119172	Tarsius syrichta	43.98	2.00e-56	212.00
IUUC-Tni-120339	Tetraodon nigroviridis	37.36	2.00e-113	402.00
IUUC-Tca-121609	Theobroma cacao	78.18	0.00e+00	995.00
IUUC-Tre-122076	Trichoderma reesei	32.30	3.00e-80	292.00
IUUC-Tvi-122528	Trichoderma virens	33.50	9.00e-90	323.00
IUUC-Tae-123530	Triticum aestivum	66.67	0.00e+00	865.00
IUUC-Tur-126845	Triticum urartu	61.51	0.00e+00	691.00
IUUC-Tme-127217	Tuber melanosporum	32.17	1.00e-82	300.00
IUUC-Tbe-127526	Tupaia belangeri	35.93	3.00e-106	378.00
IUUC-Ttr-128898	Tursiops truncatus	33.33	6.00e-93	334.00
IUUC-Vvi-131217	Vitis vinifera	78.95	0.00e+00	984.00
IUUC-Xtr-132860	Xenopus tropicalis	34.83	6.00e-94	337.00
IUUC-Xma-133830	Xiphophorus maculatus	39.19	4.00e-122	431.00
IUUC-Yli-134335	Yarrowia lipolytica	31.16	5.00e-80	291.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence