iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Oga-088274

Ensembl Protein ID

ENSOGAP00000011108.2

UniProt Accession

H0X6U6; H0X6U6_OTOGA

Genbank Protein ID

ENSOGAP00000011108

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AAQR03002881

Gene Name

DDB2

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSOGAG00000012408.2	ENSOGAT00000012412.2	ENSOGAP00000011108.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.30e-10	40.4	241	274

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf...sdtllvsGsdDgtikvWDlrt 32
           H+ +vt +a+    d+ll+++s D t+k+WDlr+
   Q: 241  HKKKVTHVALnpcCDWLLATASVDQTVKIWDLRQ 274
           7888999999975559***************986 PP

Organism

Otolemur garnettii

Protein Sequence
(Fasta)

MAPRKLPETQ KTSEIVLRLR NKRNRSPREL TPEAKKLFVK GSDSSRRCDS DCLWAGLGSL 60
QVPLPCHSIV RTLHQYKLGR AAWPALQQGL QQSFLHSLDS YRIFQKAAPF DRRATSLVWH 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCTCCCA GGAAACTCCC AGAAACCCAG AAGACCTCCG AGATTGTGTT ACGCCTCAGG 60
AACAAGAGGA ACAGAAGTCC CCGGGAGCTG ACGCCCGAGG CCAAGAAGCT CTTTGTGAAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR033312--DDB2
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0030054--C:cell junction
GO:0031465--C:Cul4B-RING E3 ubiquitin ligase complex
GO:0005654--C:nucleoplasm
GO:0043234--C:protein complex
GO:0003684--F:damaged DNA binding
GO:0004842--F:ubiquitin-protein transferase activity
GO:0035518--P:histone H2A monoubiquitination
GO:0051865--P:protein autoubiquitination
GO:0000209--P:protein polyubiquitination
GO:0006290--P:pyrimidine dimer repair
GO:0070914--P:UV-damage excision repair

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000470	Aegilops tauschii	29.41	6.00e-30	125.00
IUUC-Aml-002203	Ailuropoda melanoleuca	87.03	0.00e+00	748.00
IUUC-Atr-002957	Amborella trichopoda	30.54	4.00e-35	142.00
IUUC-Apl-003832	Anas platyrhynchos	61.96	4.00e-127	448.00
IUUC-Aca-004358	Anolis carolinensis	53.23	3.00e-129	455.00
IUUC-Aly-006296	Arabidopsis lyrata	30.82	2.00e-35	143.00
IUUC-Ath-007115	Arabidopsis thaliana	31.42	2.00e-37	150.00
IUUC-Ame-010817	Astyanax mexicanus	55.00	5.00e-122	431.00
IUUC-Bta-012914	Bos taurus	85.95	0.00e+00	763.00
IUUC-Bdi-014261	Brachypodium distachyon	30.25	1.00e-30	127.00
IUUC-Bol-015317	Brassica oleracea	31.91	2.00e-36	146.00
IUUC-Bra-016848	Brassica rapa	31.91	3.00e-36	146.00
IUUC-Cja-018967	Callithrix jacchus	89.23	0.00e+00	774.00
IUUC-Cfa-021238	Canis familiaris	86.76	0.00e+00	713.00
IUUC-Cpo-022063	Cavia porcellus	77.36	0.00e+00	692.00
IUUC-Csa-023382	Chlorocebus sabaeus	88.99	0.00e+00	802.00
IUUC-Cho-024805	Choloepus hoffmanni	59.81	2.00e-91	328.00
IUUC-Dre-028732	Danio rerio	50.55	5.00e-109	387.00
IUUC-Dor-030461	Dipodomys ordii	79.46	2.00e-124	439.00
IUUC-Ete-033038	Echinops telfairi	73.54	0.00e+00	651.00
IUUC-Eca-033772	Equus caballus	86.42	0.00e+00	717.00
IUUC-Eeu-034662	Erinaceus europaeus	62.50	1.00e-64	240.00
IUUC-Fca-036095	Felis catus	85.71	0.00e+00	722.00
IUUC-Gmo-039683	Gadus morhua	50.14	2.00e-106	378.00
IUUC-Gga-040530	Gallus gallus	54.65	3.00e-128	452.00
IUUC-Gac-041517	Gasterosteus aculeatus	50.14	5.00e-99	354.00
IUUC-Gma-043378	Glycine max	30.72	2.00e-36	147.00
IUUC-Ggo-045364	Gorilla gorilla	89.93	0.00e+00	809.00
IUUC-Hsa-046354	Homo sapiens	89.70	0.00e+00	808.00
IUUC-Hvu-047151	Hordeum vulgare	31.39	9.00e-28	117.00
IUUC-Itr-048304	Ictidomys tridecemlineatus	88.31	0.00e+00	775.00
IUUC-Lpe-051256	Leersia perrieri	29.94	5.00e-30	125.00
IUUC-Loc-052398	Lepisosteus oculatus	59.38	3.00e-126	445.00
IUUC-Laf-053562	Loxodonta africana	86.42	0.00e+00	738.00
IUUC-Mcc-055197	Macaca mulatta	69.63	3.00e-166	577.00
IUUC-Meu-056151	Macropus eugenii	75.64	2.00e-120	424.00
IUUC-Mtr-057940	Medicago truncatula	30.79	9.00e-35	141.00
IUUC-Mga-059923	Meleagris gallopavo	54.99	6.00e-136	477.00
IUUC-Mmr-061465	Microcebus murinus	95.32	2.00e-162	564.00
IUUC-Mdo-063063	Monodelphis domestica	73.68	5.00e-159	553.00
IUUC-Mmu-064294	Mus musculus	80.09	0.00e+00	697.00
IUUC-Mac-065598	Musa acuminata	30.93	1.00e-31	131.00
IUUC-Mpu-066831	Mustela putorius furo	85.92	0.00e+00	738.00
IUUC-Mlu-067222	Myotis lucifugus	81.03	0.00e+00	719.00
IUUC-Nle-069581	Nomascus leucogenys	89.93	0.00e+00	811.00
IUUC-Opr-070644	Ochotona princeps	83.73	0.00e+00	719.00
IUUC-Ont-072605	Oreochromis niloticus	49.53	8.00e-115	407.00
IUUC-Oan-072973	Ornithorhynchus anatinus	72.51	9.00e-152	529.00
IUUC-Ocu-074615	Oryctolagus cuniculus	84.78	0.00e+00	762.00
IUUC-Oba-075283	Oryza barthii	29.32	1.00e-29	124.00
IUUC-Obr-076605	Oryza brachyantha	30.98	8.00e-32	131.00
IUUC-Ogl-077512	Oryza glaberrima	29.05	1.00e-29	124.00
IUUC-Ogu-078329	Oryza glumaepatula	29.32	1.00e-29	124.00
IUUC-Oin-079980	Oryza indica	29.05	2.00e-29	124.00
IUUC-Olo-080516	Oryza longistaminata	26.33	2.00e-30	126.00
IUUC-Ome-081415	Oryza meridionalis	29.32	1.00e-29	124.00
IUUC-Oni-082985	Oryza nivara	29.05	2.00e-29	124.00
IUUC-Opu-084159	Oryza punctata	30.25	1.00e-30	127.00
IUUC-Oru-085137	Oryza rufipogon	29.05	7.00e-30	125.00
IUUC-Osa-085614	Oryza sativa	29.05	7.00e-30	125.00
IUUC-Ola-087044	Oryzias latipes	46.58	8.00e-103	367.00
IUUC-Oar-089826	Ovis aries	86.18	0.00e+00	771.00
IUUC-Ptr-091631	Pan troglodytes	89.70	0.00e+00	808.00
IUUC-Pan-092535	Papio anubis	89.46	0.00e+00	806.00
IUUC-Psi-093815	Pelodiscus sinensis	56.24	2.00e-127	449.00
IUUC-Pma-094474	Petromyzon marinus	48.25	6.00e-98	350.00
IUUC-Ppa-095414	Physcomitrella patens	28.44	2.00e-26	114.00
IUUC-Pfo-096559	Poecilia formosa	50.27	1.00e-102	367.00
IUUC-Pab-098528	Pongo abelii	89.70	0.00e+00	809.00
IUUC-Pop-100064	Populus trichocarpa	29.43	1.00e-33	137.00
IUUC-Pca-100803	Procavia capensis	83.61	0.00e+00	724.00
IUUC-Ppe-101966	Prunus persica	30.18	2.00e-34	140.00
IUUC-Pva-103213	Pteropus vampyrus	84.31	0.00e+00	706.00
IUUC-Rno-105087	Rattus norvegicus	79.86	0.00e+00	708.00
IUUC-Sha-107466	Sarcophilus harrisii	71.75	4.00e-156	544.00
IUUC-Smo-108958	Selaginella moellendorffii	28.23	1.00e-26	114.00
IUUC-Sit-109968	Setaria italica	29.32	1.00e-28	121.00
IUUC-Sly-111495	Solanum lycopersicum	30.67	6.00e-33	135.00
IUUC-Stu-112182	Solanum tuberosum	27.34	4.00e-14	73.60
IUUC-Sar-113272	Sorex araneus	79.35	4.00e-165	573.00
IUUC-Sbi-114706	Sorghum bicolor	27.38	5.00e-25	109.00
IUUC-Ssc-115437	Sus scrofa	85.71	0.00e+00	757.00
IUUC-Tgu-116602	Taeniopygia guttata	56.03	2.00e-125	442.00
IUUC-Tru-118698	Takifugu rubripes	50.42	6.00e-99	354.00
IUUC-Tsy-119027	Tarsius syrichta	85.79	0.00e+00	696.00
IUUC-Tni-119787	Tetraodon nigroviridis	50.00	9.00e-103	367.00
IUUC-Tca-121447	Theobroma cacao	29.73	4.00e-35	142.00
IUUC-Tae-123253	Triticum aestivum	29.94	3.00e-30	126.00
IUUC-Tur-126724	Triticum urartu	29.71	3.00e-30	126.00
IUUC-Tbe-127680	Tupaia belangeri	85.82	8.00e-139	486.00
IUUC-Ttr-128201	Tursiops truncatus	76.11	0.00e+00	638.00
IUUC-Vpa-130451	Vicugna pacos	68.86	8.00e-106	377.00
IUUC-Vvi-131001	Vitis vinifera	30.77	9.00e-36	144.00
IUUC-Xtr-132266	Xenopus tropicalis	62.57	7.00e-130	457.00
IUUC-Xma-133034	Xiphophorus maculatus	55.18	2.00e-114	406.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence