iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sly-110921

Ensembl Protein ID

Solyc06g065640.2.1

UniProt Accession

K4C7J3; K4C7J3_SOLLC

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Solyc06g065640.2	Solyc06g065640.2.1	Solyc06g065640.2.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.50e-24	85.1	781	814
UBD/Beta-Prp	5.10e-49	167.8	610	748

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtg 33
           gHt +++++++ ++  ll+s s D +++vW lr+g
   Q: 781  GHTKPIHSVCWdPSgELLASVSED-SVRVWTLRSG 814
           8***********666*********.9*****9998 PP

UBD/Beta-Prp

   S: 88   htlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdl.ktgkllrtltg 177
            ++++ +++v++++fs +g+ l+sG+hd+ + +w ++t +    tl++h+++++ v+++p+   l+++s D+tvr+Wd  + g  lrt+tg
   Q: 610  NAVRASSSKVVCCHFSSDGKLLASGGHDKKAVLWYTDTLKQKT-TLEEHSSLITDVRFSPSMARLATSSFDKTVRVWDAdNPGYSLRTFTG 699
           5666777777888888877888888888888888777777776.78888888888888887788888888888888877555777788877 PP
   S: 178  ghtdsvyslsfdsng.kelvsgsldgtvklwdlqtgecvrtlnghtdnvk 226
            h   v sl+f++n+   + s++ dg +++w++ +g+c r ++g t++v+
   Q: 700  -HSAGVMSLDFHPNKeDLICSCDGDGEIRYWSINNGSCTRVFKGGTAQVR 748
           .8888888888887733345777788888888888888877777777765 PP

Organism

Solanum lycopersicum

Protein Sequence
(Fasta)

MSQTNWEADK MLDVYIHDYL VKRDLKASAQ AFQAEGKVSS DPVAIDAPGG FLFEWWSVFW 60
DIFIARTNEK HSEVAASYIE TQIMKAREQQ QQQQQSQQPQ HLQQQQQQQQ QQQQQQQLQM 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTCTCAGA CCAACTGGGA AGCGGATAAA ATGTTAGTTT TCTTGTTTTT TATTGTTATT 60
ATTATATGTT TTATGTGCAT TCTTGTTTTC ACTTTTCTCT CTTTGGGTTC AGTTTTTGGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR006594--LisH
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50896--LISH
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08513--LisH
PF00400--WD40

SMART

SM00667--LisH
SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000855	Aegilops tauschii	57.31	0.00e+00	689.00
IUUC-Atr-002973	Amborella trichopoda	70.13	0.00e+00	827.00
IUUC-Aly-006446	Arabidopsis lyrata	72.98	0.00e+00	957.00
IUUC-Ath-006594	Arabidopsis thaliana	68.22	0.00e+00	927.00
IUUC-Bdi-015034	Brachypodium distachyon	60.18	0.00e+00	756.00
IUUC-Bol-015720	Brassica oleracea	69.50	0.00e+00	880.00
IUUC-Bra-017481	Brassica rapa	69.73	0.00e+00	924.00
IUUC-Gma-043858	Glycine max	86.05	0.00e+00	716.00
IUUC-Hvu-047773	Hordeum vulgare	67.36	9.00e-147	512.00
IUUC-Lpe-051536	Leersia perrieri	59.92	0.00e+00	761.00
IUUC-Mtr-058613	Medicago truncatula	72.53	0.00e+00	943.00
IUUC-Mac-064770	Musa acuminata	66.75	0.00e+00	854.00
IUUC-Oba-075419	Oryza barthii	58.64	0.00e+00	678.00
IUUC-Obr-076118	Oryza brachyantha	59.50	0.00e+00	712.00
IUUC-Ogl-077064	Oryza glaberrima	61.17	0.00e+00	743.00
IUUC-Ogu-078816	Oryza glumaepatula	57.98	0.00e+00	659.00
IUUC-Oin-079642	Oryza indica	59.97	0.00e+00	731.00
IUUC-Olo-080338	Oryza longistaminata	59.74	0.00e+00	655.00
IUUC-Ome-081901	Oryza meridionalis	58.39	0.00e+00	704.00
IUUC-Oni-082753	Oryza nivara	58.38	0.00e+00	677.00
IUUC-Opu-083283	Oryza punctata	57.05	0.00e+00	650.00
IUUC-Oru-084538	Oryza rufipogon	58.51	0.00e+00	672.00
IUUC-Osa-086142	Oryza sativa	61.44	0.00e+00	746.00
IUUC-Ppa-095985	Physcomitrella patens	67.77	4.00e-161	560.00
IUUC-Pop-098994	Populus trichocarpa	76.97	0.00e+00	1009.00
IUUC-Ppe-102018	Prunus persica	75.77	0.00e+00	979.00
IUUC-Smo-109607	Selaginella moellendorffii	57.22	0.00e+00	715.00
IUUC-Sit-109866	Setaria italica	62.32	0.00e+00	764.00
IUUC-Sbi-113848	Sorghum bicolor	61.08	0.00e+00	741.00
IUUC-Tca-121720	Theobroma cacao	76.84	0.00e+00	976.00
IUUC-Tae-124192	Triticum aestivum	59.82	0.00e+00	735.00
IUUC-Tur-126743	Triticum urartu	53.28	0.00e+00	641.00
IUUC-Vvi-131473	Vitis vinifera	77.06	0.00e+00	991.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence