iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sly-111169

Ensembl Protein ID

Solyc01g100050.2.1

UniProt Accession

K4B139; K4B139_SOLLC

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Solyc01g100050.2	Solyc01g100050.2.1	Solyc01g100050.2.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.20e-29	101.8	453	485
UBD/Beta-Prp	1.10e-51	176.5	411	658

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sd.tl.lvsGsdDgtikvWDl 30
           H++sv++laf  ++  l +v+++dD+ ikvWD+
   Q: 453  HAGSVNDLAFayPNkQLcIVTCGDDKLIKVWDI 485
           9***********7753359*************6 PP

UBD/Beta-Prp

   S: 11   svitcvkfspdksllatgsrdgtikvwdvttgkl...lrslsgheaevtavkfspdgk..ilvtgseDrtikvwdlstgkcvhtlkgheds 96
           sv + v++spd++++ +++  + + ++ +   +      ++  h + v+++ f    k   +vt+++D++ikvwd+  +k +  ++ghe+ 
   Q: 411  SV-SRVAWSPDGTFVGVAFSKHLVHLYATVGTNDlrqHLEMDAHAGSVNDLAFAYPNKqlCIVTCGDDKLIKVWDITGRKLF-NFEGHEAP 499
           33.44899*******************99887762333345889999******96666689**************9777655.79****** PP
   S: 97   vlslsfsp..sgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGsl....DrtvrlWdlktgkllrtltgghtd 181
           v+s+  ++  s +++ s+  d  i+ w  ++     + +++  ++ +++ ++ dg  l+s+++    D+++  W+ + g + rt +g  ++
   Q: 500  VYSICPHQkeSIQFIFSTAIDGKIKAWLYDNMGSRVDYDAPG-HWCTTMLYSADGTRLFSCGTgkegDSFLVEWNESEGAIKRTYSGFRKK 589
           *******98555***************998877777555554.477777778878777777654445999999999*************** PP
   S: 182  svyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvk..svrfspnderlvsgssDgsiri 248
           s   ++fd ++++++++++d+++k+wd+ + +++ t  +    ++  ++rf +++++l+++++D+ i+i
   Q: 590  SAGVVQFDTTQNHFLAVGEDSQIKFWDMDNINILTTIDADGGLPSlpRLRFNKEGNLLAVTTADNGIKI 658
           **********************************999998876652268888***************98 PP

Organism

Solanum lycopersicum

Protein Sequence
(Fasta)

MSSLSRELVF LILQFLEEEK FKESVHKLEQ ESGFFFNMKY FEEKVHAGEW DEVEKYLSGF 60
TKVDDNRYSM KIFFEIRKQK YLEALDKQDK AKAVEILVSD LKVFSTFNED LYKEITQLLT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTTCTCTCTC TATATACCTA TTCTTTCTCT CTCTAAATAT ATATATATAT ATATAATTTC 60
TCTTTCTTCT TCGGCAGCCT TTGGAAATCA AGCACTGATT TATTAATTGT TTATGTGAGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR006595--CTLH_C
IPR006594--LisH
IPR027295--Quinoprotein_ADH-like_fam
IPR011047--Quinoprotein_ADH-like_supfam
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50897--CTLH
PS50896--LISH
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00668--CTLH
SM00667--LisH
SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002904	Amborella trichopoda	69.54	0.00e+00	1214.00
IUUC-Aly-006246	Arabidopsis lyrata	73.94	0.00e+00	1651.00
IUUC-Ath-007641	Arabidopsis thaliana	72.80	0.00e+00	1693.00
IUUC-Bdi-014677	Brachypodium distachyon	72.62	0.00e+00	1647.00
IUUC-Bol-015826	Brassica oleracea	72.64	0.00e+00	1612.00
IUUC-Bra-017791	Brassica rapa	73.18	0.00e+00	1618.00
IUUC-Gma-042940	Glycine max	84.54	0.00e+00	1916.00
IUUC-Hvu-047370	Hordeum vulgare	72.59	0.00e+00	1678.00
IUUC-Lpe-050951	Leersia perrieri	72.12	0.00e+00	1618.00
IUUC-Mtr-057701	Medicago truncatula	81.96	0.00e+00	1857.00
IUUC-Mac-064999	Musa acuminata	69.62	0.00e+00	1668.00
IUUC-Oba-075415	Oryza barthii	73.82	0.00e+00	1690.00
IUUC-Obr-076726	Oryza brachyantha	73.71	0.00e+00	1696.00
IUUC-Ogl-077810	Oryza glaberrima	73.82	0.00e+00	1690.00
IUUC-Ogu-078090	Oryza glumaepatula	73.82	0.00e+00	1690.00
IUUC-Oin-080158	Oryza indica	73.71	0.00e+00	1687.00
IUUC-Olo-080271	Oryza longistaminata	73.03	0.00e+00	1653.00
IUUC-Ome-081965	Oryza meridionalis	73.99	0.00e+00	1679.00
IUUC-Oni-082421	Oryza nivara	73.73	0.00e+00	1690.00
IUUC-Opu-083912	Oryza punctata	73.82	0.00e+00	1689.00
IUUC-Oru-085201	Oryza rufipogon	73.82	0.00e+00	1690.00
IUUC-Osa-086161	Oryza sativa	73.82	0.00e+00	1690.00
IUUC-Pop-099188	Populus trichocarpa	80.28	0.00e+00	1855.00
IUUC-Ppe-101491	Prunus persica	77.13	0.00e+00	1741.00
IUUC-Sit-110487	Setaria italica	73.40	0.00e+00	1657.00
IUUC-Stu-112369	Solanum tuberosum	99.29	0.00e+00	2206.00
IUUC-Sbi-113873	Sorghum bicolor	73.32	0.00e+00	1659.00
IUUC-Tca-121768	Theobroma cacao	81.55	0.00e+00	1878.00
IUUC-Tae-125707	Triticum aestivum	72.11	0.00e+00	1667.00
IUUC-Tur-126477	Triticum urartu	68.15	0.00e+00	1634.00
IUUC-Vvi-131297	Vitis vinifera	82.88	0.00e+00	1910.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence