iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mtr-058725

Ensembl Protein ID

KEH18626

UniProt Accession

A0A072TN28; A0A072TN28_MEDTR

Genbank Protein ID

KEH18626.1

Protein Name

Transducin family protein/WD-40 repeat protein

Genbank Nucleotide ID

CM001224

Gene Name

MTR_8g027425

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
MTR_8g027425	KEH18626	KEH18626

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.60e-16	60.0	2383	2419

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvll 36
           H++svt +a  ++  l+++Gs Dg +k+WD  + +ll
   Q: 2383 HSASVTKIATiPNtSLFLTGSTDGDVKLWDAESSKLL 2419
           9*******96666599**************8777666 PP

Organism

Medicago truncatula

Protein Sequence
(Fasta)

MTPNTIKETS TSSSCSQNII DHHHLPLHLL RSDTIPPSPT LSNSTIDFLP NFSGYSWIAY 60
GASSLLVITH FPSPLSDLQS RIGPIFRQFF ELSCHHSSPV SSVSWAPQMP SHGDLAAAAE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGACACCAA ACACAATCAA AGAAACCTCA ACATCATCAT CATGTTCTCA AAACATCATA 60
GATCATCATC ATCTTCCTCT TCATCTCCTC AGATCCGACA CAATCCCACC ATCACCAACT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR022033--Rav1p_C
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12234--Rav1p_C
PF00400--WD40

SMART

SM00320--WD40

KEGG

mtr:MTR_8g027425

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000362	Aegilops tauschii	55.81	5.00e-52	195.00
IUUC-Aml-001368	Ailuropoda melanoleuca	35.78	2.00e-37	152.00
IUUC-Atr-002754	Amborella trichopoda	59.68	0.00e+00	659.00
IUUC-Apl-003377	Anas platyrhynchos	35.42	7.00e-36	147.00
IUUC-Aca-004649	Anolis carolinensis	36.25	2.00e-37	152.00
IUUC-Aly-006404	Arabidopsis lyrata	46.56	0.00e+00	1955.00
IUUC-Ath-006612	Arabidopsis thaliana	46.91	0.00e+00	1962.00
IUUC-Afu-009077	Aspergillus fumigatus	33.70	4.00e-37	150.00
IUUC-Ani-009437	Aspergillus nidulans	28.50	4.00e-37	150.00
IUUC-Ang-009742	Aspergillus niger	27.21	1.00e-39	158.00
IUUC-Ame-010919	Astyanax mexicanus	27.23	3.00e-34	141.00
IUUC-Bta-013088	Bos taurus	36.21	1.00e-37	153.00
IUUC-Bdi-014471	Brachypodium distachyon	47.12	1.00e-178	619.00
IUUC-Bol-016375	Brassica oleracea	47.46	0.00e+00	1194.00
IUUC-Bra-016630	Brassica rapa	46.84	0.00e+00	1963.00
IUUC-Cel-018537	Caenorhabditis elegans	31.53	2.00e-27	119.00
IUUC-Cja-019137	Callithrix jacchus	35.78	6.00e-37	150.00
IUUC-Cfa-021215	Canis familiaris	35.78	3.00e-37	151.00
IUUC-Cpo-022333	Cavia porcellus	34.48	7.00e-36	147.00
IUUC-Csa-023151	Chlorocebus sabaeus	36.21	3.00e-37	151.00
IUUC-Cho-024762	Choloepus hoffmanni	35.12	2.00e-34	142.00
IUUC-Csv-026055	Ciona savignyi	32.04	2.00e-33	138.00
IUUC-Dre-028673	Danio rerio	29.95	2.00e-36	149.00
IUUC-Dno-029601	Dasypus novemcinctus	32.35	4.00e-27	118.00
IUUC-Dor-030381	Dipodomys ordii	34.91	2.00e-36	149.00
IUUC-Dme-031825	Drosophila melanogaster	36.03	2.00e-39	159.00
IUUC-Ete-033176	Echinops telfairi	28.83	6.00e-35	144.00
IUUC-Eca-033386	Equus caballus	29.03	6.00e-37	150.00
IUUC-Eeu-035011	Erinaceus europaeus	34.48	4.00e-35	144.00
IUUC-Fca-035735	Felis catus	36.48	3.00e-37	151.00
IUUC-Fal-037367	Ficedula albicollis	35.42	2.00e-37	152.00
IUUC-Gmo-038514	Gadus morhua	29.86	3.00e-33	138.00
IUUC-Gga-040693	Gallus gallus	28.36	1.00e-37	152.00
IUUC-Gac-041986	Gasterosteus aculeatus	27.90	2.00e-35	145.00
IUUC-Gma-044099	Glycine max	75.47	0.00e+00	3653.00
IUUC-Ggo-044811	Gorilla gorilla	35.78	5.00e-37	150.00
IUUC-Hsa-045950	Homo sapiens	35.78	5.00e-37	150.00
IUUC-Hvu-047213	Hordeum vulgare	64.86	7.00e-113	399.00
IUUC-Itr-047982	Ictidomys tridecemlineatus	26.87	7.00e-39	157.00
IUUC-Lch-049469	Latimeria chalumnae	29.63	2.00e-36	148.00
IUUC-Lpe-051382	Leersia perrieri	39.85	0.00e+00	1303.00
IUUC-Loc-052909	Lepisosteus oculatus	27.15	3.00e-37	151.00
IUUC-Laf-054195	Loxodonta africana	35.78	1.00e-37	153.00
IUUC-Mcc-055646	Macaca mulatta	35.78	5.00e-37	150.00
IUUC-Meu-056627	Macropus eugenii	32.51	4.00e-23	104.00
IUUC-Mga-059386	Meleagris gallopavo	35.42	3.00e-35	145.00
IUUC-Mmr-060784	Microcebus murinus	36.21	2.00e-37	152.00
IUUC-Mdo-062914	Monodelphis domestica	34.76	3.00e-35	145.00
IUUC-Mmu-063808	Mus musculus	35.78	3.00e-37	151.00
IUUC-Mac-065224	Musa acuminata	43.86	0.00e+00	1776.00
IUUC-Mpu-066054	Mustela putorius furo	29.22	1.00e-35	146.00
IUUC-Mlu-067458	Myotis lucifugus	35.78	1.00e-36	149.00
IUUC-Nfi-068420	Neosartorya fischeri	33.70	7.00e-36	145.00
IUUC-Nle-070123	Nomascus leucogenys	35.78	6.00e-37	150.00
IUUC-Opr-070543	Ochotona princeps	25.95	3.00e-21	98.60
IUUC-Ont-071658	Oreochromis niloticus	26.32	7.00e-35	143.00
IUUC-Oan-072796	Ornithorhynchus anatinus	30.14	1.00e-16	79.00
IUUC-Ocu-074048	Oryctolagus cuniculus	35.34	6.00e-37	150.00
IUUC-Oba-075826	Oryza barthii	41.04	0.00e+00	1569.00
IUUC-Obr-076145	Oryza brachyantha	40.30	0.00e+00	1531.00
IUUC-Ogu-078307	Oryza glumaepatula	41.10	0.00e+00	1591.00
IUUC-Oin-080118	Oryza indica	39.03	0.00e+00	921.00
IUUC-Olo-080848	Oryza longistaminata	51.40	8.00e-173	601.00
IUUC-Oni-082792	Oryza nivara	42.56	0.00e+00	1258.00
IUUC-Opu-084153	Oryza punctata	40.32	0.00e+00	1256.00
IUUC-Oru-084415	Oryza rufipogon	41.34	0.00e+00	1228.00
IUUC-Osa-085332	Oryza sativa	54.88	0.00e+00	636.00
IUUC-Ola-087560	Oryzias latipes	31.67	8.00e-34	140.00
IUUC-Oga-088816	Otolemur garnettii	35.34	3.00e-37	151.00
IUUC-Oar-089618	Ovis aries	36.21	1.00e-37	152.00
IUUC-Ptr-090937	Pan troglodytes	35.78	6.00e-37	150.00
IUUC-Pan-092151	Papio anubis	35.78	5.00e-37	150.00
IUUC-Psi-093590	Pelodiscus sinensis	35.00	2.00e-37	152.00
IUUC-Ppa-095505	Physcomitrella patens	29.59	2.00e-166	580.00
IUUC-Pfo-097445	Poecilia formosa	27.91	2.00e-36	149.00
IUUC-Pab-098237	Pongo abelii	35.78	5.00e-37	150.00
IUUC-Pop-098812	Populus trichocarpa	53.25	0.00e+00	2444.00
IUUC-Pca-101008	Procavia capensis	35.78	3.00e-37	151.00
IUUC-Ppe-101610	Prunus persica	56.18	0.00e+00	2629.00
IUUC-Pva-102348	Pteropus vampyrus	35.34	1.00e-36	149.00
IUUC-Rno-105076	Rattus norvegicus	36.21	8.00e-38	153.00
IUUC-Sha-106860	Sarcophilus harrisii	34.76	1.00e-35	146.00
IUUC-Sja-107657	Schizosaccharomyces japonicus	26.40	2.00e-24	107.00
IUUC-Smo-109444	Selaginella moellendorffii	53.30	1.00e-126	445.00
IUUC-Sit-109981	Setaria italica	43.45	0.00e+00	814.00
IUUC-Sly-110968	Solanum lycopersicum	46.30	0.00e+00	2068.00
IUUC-Stu-111939	Solanum tuberosum	71.51	2.00e-76	276.00
IUUC-Sar-113751	Sorex araneus	45.05	2.00e-21	99.00
IUUC-Sbi-113768	Sorghum bicolor	63.07	3.00e-65	239.00
IUUC-Ssc-116371	Sus scrofa	36.21	1.00e-37	152.00
IUUC-Tgu-117108	Taeniopygia guttata	35.83	2.00e-37	152.00
IUUC-Tru-118349	Takifugu rubripes	34.57	1.00e-34	142.00
IUUC-Tsy-118837	Tarsius syrichta	33.19	2.00e-33	139.00
IUUC-Tni-119924	Tetraodon nigroviridis	34.57	2.00e-34	142.00
IUUC-Tca-121789	Theobroma cacao	53.18	0.00e+00	2277.00
IUUC-Tae-125726	Triticum aestivum	39.37	0.00e+00	1500.00
IUUC-Tur-126437	Triticum urartu	40.72	8.00e-58	218.00
IUUC-Tbe-127760	Tupaia belangeri	28.44	4.00e-38	154.00
IUUC-Ttr-128991	Tursiops truncatus	36.64	7.00e-38	153.00
IUUC-Vpa-130309	Vicugna pacos	36.21	2.00e-37	152.00
IUUC-Vvi-131584	Vitis vinifera	50.98	0.00e+00	925.00
IUUC-Xtr-132638	Xenopus tropicalis	29.44	4.00e-36	147.00
IUUC-Xma-134022	Xiphophorus maculatus	35.39	7.00e-36	147.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence