iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ppa-095297

Ensembl Protein ID

PP1S28_115V6.1

UniProt Accession

A9RTT3; A9RTT3_PHYPA

Genbank Protein ID

EDQ77540.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

DS544917

Gene Name

PHYPADRAFT_205506

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PP1S28_115V6	PP1S28_115V6.1	PP1S28_115V6.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	7.60e-13	48.9	211	245

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtcl.af...sd.tllvsGsdDgtikvWDl 30
           gH+++v cl  f   s+ t+l+sG++Dgt+ +W++
   Q: 211  GHKGPVACLlTFqasSGeTMLISGGNDGTLSLWNV 245
           8*******7369**8779****************7 PP

Organism

Physcomitrella patens

Protein Sequence
(Fasta)

MLRLRAFRPT QDKVVKLLLH PTYPWLVTAD ASDNVVVWDW EHRQVVYEVN VKGVDERRLV 60
GAQLQKLAEG EAEAKSKSGI EAIRGGSVKH VTFYDDDVRY WQASMARSAA GELSITAGQQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AAGGGTCTCA TCAGTGAGCG AGTGAATGAG GGAGGCTTCA TCGATTTTGT GTTGTTGTTG 60
CGAGCCTCGT TGCTCATGTT CGTGAGCGTA CAGTAGGCGA CGATCTCCAG ATCTTTGAGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

KEGG

ppp:PHYPADRAFT_205506

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000321	Aegilops tauschii	48.05	0.00e+00	718.00
IUUC-Atr-002897	Amborella trichopoda	60.69	0.00e+00	1295.00
IUUC-Aly-006154	Arabidopsis lyrata	58.83	0.00e+00	1246.00
IUUC-Ath-007285	Arabidopsis thaliana	59.15	0.00e+00	1251.00
IUUC-Bdi-014824	Brachypodium distachyon	59.46	0.00e+00	1237.00
IUUC-Bol-016428	Brassica oleracea	59.64	0.00e+00	1243.00
IUUC-Bra-017475	Brassica rapa	56.52	0.00e+00	1246.00
IUUC-Gma-043699	Glycine max	59.31	0.00e+00	1249.00
IUUC-Hvu-047404	Hordeum vulgare	59.02	3.00e-100	357.00
IUUC-Mtr-058798	Medicago truncatula	56.98	0.00e+00	1248.00
IUUC-Mac-065076	Musa acuminata	58.18	0.00e+00	1291.00
IUUC-Oba-075727	Oryza barthii	58.87	0.00e+00	1215.00
IUUC-Obr-076460	Oryza brachyantha	60.42	0.00e+00	1285.00
IUUC-Ogl-077837	Oryza glaberrima	61.06	0.00e+00	1291.00
IUUC-Ogu-078912	Oryza glumaepatula	58.87	0.00e+00	1215.00
IUUC-Oin-079644	Oryza indica	61.06	0.00e+00	1286.00
IUUC-Olo-080463	Oryza longistaminata	59.67	0.00e+00	1044.00
IUUC-Ome-081748	Oryza meridionalis	58.87	0.00e+00	1212.00
IUUC-Oni-083096	Oryza nivara	58.87	0.00e+00	1215.00
IUUC-Opu-083280	Oryza punctata	60.98	0.00e+00	1290.00
IUUC-Oru-084728	Oryza rufipogon	58.87	0.00e+00	1212.00
IUUC-Osa-085295	Oryza sativa	61.06	0.00e+00	1286.00
IUUC-Ppe-101567	Prunus persica	56.88	0.00e+00	1316.00
IUUC-Smo-109297	Selaginella moellendorffii	61.88	0.00e+00	1318.00
IUUC-Sit-109913	Setaria italica	59.93	0.00e+00	1250.00
IUUC-Sly-110980	Solanum lycopersicum	61.59	0.00e+00	1239.00
IUUC-Stu-112643	Solanum tuberosum	59.67	0.00e+00	1241.00
IUUC-Sbi-114411	Sorghum bicolor	61.70	0.00e+00	1035.00
IUUC-Tca-121691	Theobroma cacao	59.45	0.00e+00	1277.00
IUUC-Tae-124034	Triticum aestivum	59.92	0.00e+00	1219.00
IUUC-Tur-126798	Triticum urartu	58.12	1.00e-179	623.00
IUUC-Vvi-131320	Vitis vinifera	61.67	0.00e+00	900.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence