iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Stu-112643

Ensembl Protein ID

PGSC0003DMT400046936

UniProt Accession

M1BJW0; M1BJW0_SOLTU

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PGSC0003DMG400018227	PGSC0003DMT400046936	PGSC0003DMT400046936

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.50e-08	35.1	210	243

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtcla.f...sd.tllvsGsdDgtikvWD 29
           gH++ ++cl  f   s+  llvsG+ Dg + +W+
   Q: 210  GHKGAISCLMnFmaaSGeSLLVSGGSDGLLVLWS 243
           8*******855****7789**************8 PP

Organism

Solanum tuberosum

Protein Sequence
(Fasta)

MLRLRAFRPT NDKIVKIQMH PTHPWLVTAD ASDHVSVWNW EHRQIIYELK PGGVDERRLV 60
GAKLEKLAEG ESEPRGKPTE AIRGGSVKQV SFYDDDVRFW QLWRNQSAAA ESPAAAGHVT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTCACACACT GTGCATCTTG TTCTTCTTTG TCGCTCGCCG GTCCAAGACG CCTTTTAATC 60
GGTCCTTTTT AAAACCATAG TTGTTCATTT TCACTGAACC GGCTAAACAC TCCAACAACC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

SMART

SM00320--WD40

KEGG

sot:102597779

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000321	Aegilops tauschii	64.72	0.00e+00	1068.00
IUUC-Atr-002897	Amborella trichopoda	76.15	0.00e+00	1649.00
IUUC-Aly-006154	Arabidopsis lyrata	79.31	0.00e+00	1773.00
IUUC-Ath-007285	Arabidopsis thaliana	79.30	0.00e+00	1777.00
IUUC-Bdi-014824	Brachypodium distachyon	77.59	0.00e+00	1641.00
IUUC-Bol-016428	Brassica oleracea	77.65	0.00e+00	1737.00
IUUC-Bra-017475	Brassica rapa	78.29	0.00e+00	1736.00
IUUC-Gma-043699	Glycine max	80.69	0.00e+00	1749.00
IUUC-Hvu-047404	Hordeum vulgare	81.06	3.00e-137	479.00
IUUC-Mtr-058798	Medicago truncatula	79.64	0.00e+00	1778.00
IUUC-Mac-065076	Musa acuminata	80.39	0.00e+00	1781.00
IUUC-Oba-075727	Oryza barthii	68.71	0.00e+00	1631.00
IUUC-Obr-076460	Oryza brachyantha	78.02	0.00e+00	1698.00
IUUC-Ogl-077837	Oryza glaberrima	70.82	0.00e+00	1712.00
IUUC-Ogu-078912	Oryza glumaepatula	68.97	0.00e+00	1628.00
IUUC-Oin-079644	Oryza indica	78.44	0.00e+00	1704.00
IUUC-Olo-080463	Oryza longistaminata	68.92	0.00e+00	1419.00
IUUC-Ome-081748	Oryza meridionalis	76.06	0.00e+00	1622.00
IUUC-Oni-083096	Oryza nivara	75.98	0.00e+00	1625.00
IUUC-Opu-083280	Oryza punctata	78.52	0.00e+00	1719.00
IUUC-Oru-084728	Oryza rufipogon	75.98	0.00e+00	1622.00
IUUC-Osa-085295	Oryza sativa	78.44	0.00e+00	1704.00
IUUC-Ppa-095297	Physcomitrella patens	59.42	0.00e+00	1281.00
IUUC-Ppe-101567	Prunus persica	77.94	0.00e+00	1865.00
IUUC-Smo-109297	Selaginella moellendorffii	61.78	0.00e+00	1315.00
IUUC-Sit-109913	Setaria italica	78.32	0.00e+00	1698.00
IUUC-Sly-110980	Solanum lycopersicum	97.57	0.00e+00	2252.00
IUUC-Sbi-114411	Sorghum bicolor	78.73	0.00e+00	1363.00
IUUC-Tca-121691	Theobroma cacao	81.38	0.00e+00	1858.00
IUUC-Tae-124034	Triticum aestivum	77.76	0.00e+00	1615.00
IUUC-Tur-126798	Triticum urartu	76.92	0.00e+00	799.00
IUUC-Vvi-131320	Vitis vinifera	86.17	0.00e+00	1239.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence