iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Atr-002816

Ensembl Protein ID

ERN06895

UniProt Accession

W1PIF9; W1PIF9_AMBTC

Genbank Protein ID

ERN06895.1

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

KI393866

Gene Name

AMTR_s00005p00254320

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
AMTR_s00005p00254320	ERN06895	ERN06895

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	1.90e-32	111.6	280	352

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceenss 74
           +peef+CpIsl+lM dPv+++sG+ty+r +Iekw+++g+ tcP+t+q+l++ +l+Pn+ ++ li +wce+n+ 
   Q: 280  PPEEFRCPISLQLMYDPVIISSGQTYERVCIEKWFDDGHDTCPKTQQKLSHLSLTPNYCVKGLIASWCEQNGM 352
           69********************************************************************985 PP

Organism

Amborella trichopoda

Protein Sequence
(Fasta)

MMDTAEVEES LFAVSDAKLH GEMCKKLSEF VCKVMAIFPA LEASRPRCKS GLQALCSLHV 60
ALEKSKNLLQ HCSDCSKLYL AITSDSVLLK FEKARCALEQ SLRRVEDIVP QAIGCQILEI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGATGGATA CTGCTGAAGT CGAAGAAAGT CTTTTTGCAG TTAGTGATGC TAAGGTATGC 60
CTATCTGCTG AAGTGGAATA TTGAACGGTC AATTATTAGA GTGCAATATT AACTGTTAAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000843	Aegilops tauschii	52.48	0.00e+00	740.00
IUUC-Aly-006182	Arabidopsis lyrata	57.12	0.00e+00	808.00
IUUC-Ath-007134	Arabidopsis thaliana	53.35	0.00e+00	801.00
IUUC-Bdi-014509	Brachypodium distachyon	51.17	0.00e+00	704.00
IUUC-Bol-015502	Brassica oleracea	55.53	0.00e+00	784.00
IUUC-Bra-017800	Brassica rapa	55.66	0.00e+00	788.00
IUUC-Gma-043476	Glycine max	56.53	0.00e+00	837.00
IUUC-Hvu-047761	Hordeum vulgare	52.08	0.00e+00	719.00
IUUC-Lpe-051154	Leersia perrieri	52.73	0.00e+00	733.00
IUUC-Mtr-058026	Medicago truncatula	56.49	0.00e+00	792.00
IUUC-Mac-064644	Musa acuminata	62.66	6.00e-129	453.00
IUUC-Oba-075037	Oryza barthii	52.28	0.00e+00	758.00
IUUC-Obr-076068	Oryza brachyantha	51.80	0.00e+00	724.00
IUUC-Ogl-077029	Oryza glaberrima	52.28	0.00e+00	758.00
IUUC-Ogu-078230	Oryza glumaepatula	52.05	0.00e+00	751.00
IUUC-Oin-079566	Oryza indica	52.24	0.00e+00	756.00
IUUC-Olo-080879	Oryza longistaminata	52.69	0.00e+00	708.00
IUUC-Ome-081577	Oryza meridionalis	52.12	0.00e+00	756.00
IUUC-Oni-082610	Oryza nivara	52.00	0.00e+00	748.00
IUUC-Opu-083186	Oryza punctata	52.04	0.00e+00	757.00
IUUC-Oru-084375	Oryza rufipogon	52.04	0.00e+00	747.00
IUUC-Osa-085376	Oryza sativa	52.04	0.00e+00	746.00
IUUC-Ppa-095879	Physcomitrella patens	36.72	8.00e-128	450.00
IUUC-Pop-100088	Populus trichocarpa	56.98	0.00e+00	884.00
IUUC-Ppe-101913	Prunus persica	60.32	0.00e+00	917.00
IUUC-Sit-109865	Setaria italica	52.28	0.00e+00	758.00
IUUC-Sly-110840	Solanum lycopersicum	54.95	0.00e+00	797.00
IUUC-Stu-112347	Solanum tuberosum	54.81	0.00e+00	791.00
IUUC-Sbi-114310	Sorghum bicolor	51.15	0.00e+00	726.00
IUUC-Tca-121734	Theobroma cacao	58.91	0.00e+00	891.00
IUUC-Tae-123152	Triticum aestivum	52.73	0.00e+00	748.00
IUUC-Tur-126692	Triticum urartu	51.23	0.00e+00	647.00
IUUC-Vvi-131273	Vitis vinifera	58.62	0.00e+00	915.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence