iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Vvi-131273

UUCD1 version

UUC-ViV-00683

Ensembl Protein ID

VIT_01s0010g02890.t01

UniProt Accession

F6HG65; F6HG65_VITVI

Genbank Protein ID

CCB51258.1

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

FN595754

Gene Name

VIT_01s0010g02890

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
VIT_01s0010g02890	VIT_01s0010g02890.t01	VIT_01s0010g02890.t01

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	3.90e-30	104.3	282	352

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 4    eeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceenss 74
           ee++CpIsl+lM dPv+++sG+ty+r +Iekw+++g++tcP+t+q+l++  l+Pn+ ++ li +wce+n++
   Q: 282  EELRCPISLQLMYDPVIISSGQTYERICIEKWFSDGHNTCPKTQQQLSHLCLTPNYCVKGLIASWCEQNGV 352
           899*****************************************************************986 PP

Organism

Vitis vinifera

Protein Sequence
(Fasta)

MDIHEVEESL FAVSDAKLHG GMCRMLSTIY CKILEIFPVL EAARPRSKSG IQALCSLHIA 60
LEKAKNILQH CSECSKLYLA ITGDSVALKF EKARCALADS LRRVEDIVPQ TIGVQISEIV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGATATTC ATGAGGTTGA AGAGAGTTTG TTCGCGGTCA GTGATGCCAA GGTATGGATG 60
CTATATCTGC TTGAAGTTTT AAGAAATGAG CGTTGGGAAT TTTATTCTGA CTTGCTTATT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

KEGG

vvi:100256374

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000843	Aegilops tauschii	56.98	0.00e+00	839.00
IUUC-Atr-002816	Amborella trichopoda	57.76	0.00e+00	829.00
IUUC-Aly-005662	Arabidopsis lyrata	68.36	0.00e+00	1009.00
IUUC-Ath-007134	Arabidopsis thaliana	68.27	0.00e+00	1064.00
IUUC-Bdi-014509	Brachypodium distachyon	56.07	0.00e+00	811.00
IUUC-Bol-015443	Brassica oleracea	68.74	0.00e+00	1023.00
IUUC-Bra-017668	Brassica rapa	69.07	0.00e+00	1032.00
IUUC-Gma-043476	Glycine max	73.47	0.00e+00	1130.00
IUUC-Hvu-047761	Hordeum vulgare	56.74	0.00e+00	820.00
IUUC-Lpe-051154	Leersia perrieri	57.64	0.00e+00	833.00
IUUC-Mtr-058026	Medicago truncatula	71.90	0.00e+00	1041.00
IUUC-Mac-064644	Musa acuminata	55.40	0.00e+00	733.00
IUUC-Oba-075037	Oryza barthii	57.94	0.00e+00	870.00
IUUC-Obr-076068	Oryza brachyantha	56.40	0.00e+00	830.00
IUUC-Ogl-077029	Oryza glaberrima	57.94	0.00e+00	870.00
IUUC-Ogu-078230	Oryza glumaepatula	57.59	0.00e+00	862.00
IUUC-Oin-079566	Oryza indica	57.94	0.00e+00	869.00
IUUC-Olo-080879	Oryza longistaminata	60.16	0.00e+00	830.00
IUUC-Ome-081577	Oryza meridionalis	57.69	0.00e+00	865.00
IUUC-Oni-082610	Oryza nivara	57.59	0.00e+00	862.00
IUUC-Opu-083186	Oryza punctata	57.52	0.00e+00	865.00
IUUC-Oru-084375	Oryza rufipogon	56.89	0.00e+00	852.00
IUUC-Osa-085376	Oryza sativa	57.43	0.00e+00	855.00
IUUC-Ppa-095879	Physcomitrella patens	37.37	4.00e-126	444.00
IUUC-Pop-100088	Populus trichocarpa	75.98	0.00e+00	1204.00
IUUC-Ppe-101913	Prunus persica	74.94	0.00e+00	1172.00
IUUC-Sit-109865	Setaria italica	57.73	0.00e+00	867.00
IUUC-Sly-110840	Solanum lycopersicum	71.26	0.00e+00	1092.00
IUUC-Stu-112347	Solanum tuberosum	71.46	0.00e+00	1068.00
IUUC-Sbi-114310	Sorghum bicolor	56.13	0.00e+00	850.00
IUUC-Tca-121734	Theobroma cacao	76.84	0.00e+00	1176.00
IUUC-Tae-125766	Triticum aestivum	56.81	0.00e+00	853.00
IUUC-Tur-126692	Triticum urartu	54.59	0.00e+00	730.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence