iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bol-015324

Ensembl Protein ID

Bo4g125740.1

UniProt Accession

A0A0D3BYL8; A0A0D3BYL8_BRAOL

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bo4g125740	Bo4g125740.1	Bo4g125740.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	7.60e-25	87.4	176	211

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclafsd.tllvsGsdDgtikvWDlrtgvllk 37
           H+ds++cla    +++ sGs+D+t+kvW+l++ ++l 
   Q: 176  HADSISCLAV-HaGIIYSGSWDKTLKVWRLSDLKCLE 211
           9********9.559******************99986 PP

Organism

Brassica oleracea

Protein Sequence
(Fasta)

MVRSIQEGDL MASSPSSSST TTTNETDSDG SLSPSSSSKS FVLTTLPPLI TAAYKPLAVL 60
SAHVGSVSSL ALCGEFLLSA SQGKDIIVWQ QPDLKIFAKF GQGDGSVKAL VSVGSKVFTA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGTGAGAT CAATCCAAGA AGGAGACTTG ATGGCGTCTT CACCTTCTTC CTCTTCAACA 60
ACCACAACCA ACGAAACCGA CTCCGACGGT TCCCTCAGCC CATCCTCCTC CTCAAAAAGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002847	Amborella trichopoda	63.93	6.00e-121	427.00
IUUC-Aly-005620	Arabidopsis lyrata	90.34	0.00e+00	673.00
IUUC-Ath-006729	Arabidopsis thaliana	85.38	0.00e+00	672.00
IUUC-Bdi-014229	Brachypodium distachyon	55.40	1.00e-96	346.00
IUUC-Bra-017033	Brassica rapa	96.46	0.00e+00	711.00
IUUC-Gma-043773	Glycine max	74.56	3.00e-142	497.00
IUUC-Hvu-047162	Hordeum vulgare	52.73	1.00e-75	276.00
IUUC-Lpe-050845	Leersia perrieri	52.57	7.00e-89	320.00
IUUC-Mtr-058525	Medicago truncatula	71.08	5.00e-146	510.00
IUUC-Oba-075989	Oryza barthii	56.77	5.00e-113	400.00
IUUC-Obr-076522	Oryza brachyantha	56.57	1.00e-110	392.00
IUUC-Ogl-077747	Oryza glaberrima	55.78	1.00e-111	395.00
IUUC-Ogu-078306	Oryza glumaepatula	57.92	2.00e-110	392.00
IUUC-Oin-079397	Oryza indica	57.38	1.00e-109	389.00
IUUC-Olo-080627	Oryza longistaminata	68.34	7.00e-75	273.00
IUUC-Ome-081295	Oryza meridionalis	56.83	5.00e-109	387.00
IUUC-Oni-082259	Oryza nivara	55.78	1.00e-111	395.00
IUUC-Opu-083686	Oryza punctata	57.30	7.00e-111	393.00
IUUC-Oru-084598	Oryza rufipogon	57.38	1.00e-109	389.00
IUUC-Osa-085705	Oryza sativa	55.78	3.00e-107	381.00
IUUC-Pop-099167	Populus trichocarpa	75.69	2.00e-151	528.00
IUUC-Ppe-101179	Prunus persica	73.58	2.00e-151	528.00
IUUC-Sit-109966	Setaria italica	59.48	2.00e-104	372.00
IUUC-Stu-112315	Solanum tuberosum	69.31	5.00e-140	490.00
IUUC-Sbi-114323	Sorghum bicolor	53.85	3.00e-101	361.00
IUUC-Tca-121448	Theobroma cacao	75.41	5.00e-150	523.00
IUUC-Tae-123437	Triticum aestivum	55.35	5.00e-104	370.00
IUUC-Vvi-131470	Vitis vinifera	68.70	3.00e-144	504.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence