iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sly-111222

Ensembl Protein ID

Solyc01g068250.2.1

UniProt Accession

K4AX72; K4AX72_SOLLC

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Solyc01g068250.2	Solyc01g068250.2.1	Solyc01g068250.2.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.50e-21	75.1	188	223

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    HtdsvtclafsdtllvsGsdDgtikvWDlrtgvllk 37
           H+ds++cla s++++ sGs+D+t+kvW++++ ++l 
   Q: 188  HADSISCLAVSNGYIYSGSWDKTLKVWRISDLKCLE 223
           9*********66*****************9999986 PP

Organism

Solanum lycopersicum

Protein Sequence
(Fasta)

MLQSKPKSFP LSSMASPPYT TPLLSESSNS IISTTSSESD ESPQTSQRFQ DFQLKISTTP 60
ISCFRSYKSL AVLSGHVGTV SCLALCGEFI LSASQGKDII VWQQPDLRQF TKFGTGDGSV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TAATTAAAAG CTCCATCTTT TTACTATCTT CTTCTTCTTC TTCATCTCTC TCTGTTTTCA 60
TATTCAAAAA TGCTTCAATC AAAGCCAAAA AGCTTTCCAC TTTCATCAAT GGCATCACCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

KEGG

sly:101257208

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002847	Amborella trichopoda	70.75	2.00e-134	471.00
IUUC-Aly-005620	Arabidopsis lyrata	71.69	3.00e-143	500.00
IUUC-Ath-006729	Arabidopsis thaliana	70.16	2.00e-142	497.00
IUUC-Bdi-014229	Brachypodium distachyon	54.25	7.00e-98	350.00
IUUC-Bol-015680	Brassica oleracea	68.34	8.00e-138	482.00
IUUC-Bra-017666	Brassica rapa	69.05	4.00e-138	483.00
IUUC-Gma-043773	Glycine max	77.34	2.00e-149	521.00
IUUC-Hvu-047162	Hordeum vulgare	53.92	2.00e-75	274.00
IUUC-Lpe-050845	Leersia perrieri	54.80	8.00e-91	326.00
IUUC-Mtr-058525	Medicago truncatula	75.43	1.00e-146	511.00
IUUC-Mac-064928	Musa acuminata	66.17	1.00e-115	409.00
IUUC-Oba-075989	Oryza barthii	59.83	2.00e-111	394.00
IUUC-Obr-076522	Oryza brachyantha	58.64	3.00e-112	397.00
IUUC-Ogl-077747	Oryza glaberrima	58.71	1.00e-109	389.00
IUUC-Ogu-078306	Oryza glumaepatula	59.54	3.00e-109	387.00
IUUC-Oin-079397	Oryza indica	59.54	4.00e-109	387.00
IUUC-Olo-080627	Oryza longistaminata	61.32	2.00e-76	278.00
IUUC-Ome-081295	Oryza meridionalis	59.25	2.00e-108	385.00
IUUC-Oni-082259	Oryza nivara	58.71	1.00e-109	389.00
IUUC-Opu-083686	Oryza punctata	61.00	4.00e-111	394.00
IUUC-Oru-084598	Oryza rufipogon	59.54	4.00e-109	387.00
IUUC-Osa-085705	Oryza sativa	58.71	2.00e-105	375.00
IUUC-Ppa-095765	Physcomitrella patens	41.12	3.00e-75	274.00
IUUC-Pop-099167	Populus trichocarpa	76.08	4.00e-161	560.00
IUUC-Ppe-101179	Prunus persica	75.07	5.00e-161	560.00
IUUC-Sit-109966	Setaria italica	60.18	2.00e-108	385.00
IUUC-Stu-112315	Solanum tuberosum	89.08	0.00e+00	697.00
IUUC-Sbi-114323	Sorghum bicolor	53.52	2.00e-102	365.00
IUUC-Tca-121448	Theobroma cacao	76.22	3.00e-158	550.00
IUUC-Tae-123485	Triticum aestivum	56.75	2.00e-105	375.00
IUUC-Vvi-131470	Vitis vinifera	79.26	2.00e-165	573.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence