iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Details
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Oin-079130

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

CM000126

Gene Name

OsI_05393

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
BGIOSGA005266	BGIOSGA005266-TA	BGIOSGA005266-PA

Status

Reviewed

Details

Family	Domain	References (PMIDs)
E3 activity/RING/RING	RING	23571674

Classification

Family	E-value	Score	Start	End
E3 activity/RING/RING	5.80e-06	27.7	131	172

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+C+e+f    + + +pC H++h++C+  w         + +CP+Cr
   Q: 131  CAVCKEPFhlAAEAREMPCAHIYHHHCILPW------LALHNSCPVCR 172
           ******9999444899***************......**********8 PP

Organism

Oryza indica

Protein Sequence
(Fasta)

MDDDASSYTY WCHSCDRFVH PHPHLDAAVL CPHCNAAGFL HDHEMPPAAD HSPFNPPVIV 60
LRRSASPDDA TTFDLLYDDG AASALRPLFD RLLLRIPSAS DNPNPPASKA AVDSMPTILI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGACGACG ACGCCTCCTC CTACACCTAC TGGTGCCACA GCTGCGACCG CTTCGTCCAT 60
CCGCACCCCC ACCTCGACGC CGCTGTGCTC TGTCCCCACT GCAACGCCGC CGGCTTCCTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR010543--DUF1117
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF06547--DUF1117
PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Oba-075442	Oryza barthii	91.62	5.00e-130	456.00
IUUC-Ogl-077848	Oryza glaberrima	91.62	5.00e-130	456.00
IUUC-Ogu-078558	Oryza glumaepatula	92.51	9.00e-132	462.00
IUUC-Olo-080227	Oryza longistaminata	86.90	1.00e-117	414.00
IUUC-Ome-081117	Oryza meridionalis	82.39	1.00e-108	385.00
IUUC-Oni-082454	Oryza nivara	99.40	1.00e-137	481.00
IUUC-Oru-084818	Oryza rufipogon	92.19	1.00e-131	461.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence