iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Dre-027782

UUCD1 version

UUC-DaR-01284

Ensembl Protein ID

ENSDARP00000071531.5

UniProt Accession

Q7T2E1; Q7T2E1_DANRE

Genbank Protein ID

AAH54585.1; AAI53484.1; CAK11154.1

Protein Name

SEC13 homolog (S. cerevisiae); SEC13 homolog, nuclear pore and COPII coat complex component; SEC13-like 1 (S. cerevisiae)

Genbank Nucleotide ID

BX537350; BC153483; CT027575

Gene Name

sec13; sec13l1; DKEY-72G22.2-001

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSDARG00000054807.5	ENSDART00000077063.5	ENSDARP00000071531.5

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.10e-26	92.7	55	87

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sd..tllvsGsdDgtikvWD 29
           gH+++v+ +a+  +   ++l+s+s+D ++ +W 
   Q: 55   GHEGPVWQVAWahPMygNILASCSYDRKVIIWK 87
           8***********9666699*************7 PP

Organism

Danio rerio

Protein Sequence
(Fasta)

MVSVINTVDT SHEDMIHDAQ MDYYGTRLAT CSSDRSVKIF DVKNGGQILV ADLRGHEGPV 60
WQVAWAHPMY GNILASCSYD RKVIIWKEEN STWDKMYEYT GHDSSVNSVC WGPYDFGLIL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ACGGAGGGTT TAGCTGCAGG AACACAGTCC GCTCTGAGCG GTCAGGTTTG CCACGTCGGA 60
AATATTATCA GTATATTATT TTCTGAAGCA CTGAGGAGTA AAAAGGGTAC ATTCTTAAAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0070971--C:endoplasmic reticulum exit site
GO:0051216--P:cartilage development
GO:0055123--P:digestive system development
GO:0007029--P:endoplasmic reticulum organization
GO:0006888--P:ER to Golgi vesicle-mediated transport
GO:0070278--P:extracellular matrix constituent secretion
GO:0042462--P:eye photoreceptor cell development
GO:0001889--P:liver development
GO:0036372--P:opsin transport
GO:0010842--P:retina layer formation

KEGG

dre:798071

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000671	Aegilops tauschii	53.31	2.00e-92	332.00
IUUC-Aml-001832	Ailuropoda melanoleuca	87.58	2.00e-169	588.00
IUUC-Atr-002914	Amborella trichopoda	55.52	5.00e-94	337.00
IUUC-Apl-003992	Anas platyrhynchos	88.82	2.00e-164	571.00
IUUC-Aca-005283	Anolis carolinensis	89.69	2.00e-174	604.00
IUUC-Aly-005654	Arabidopsis lyrata	55.85	4.00e-92	330.00
IUUC-Ath-006816	Arabidopsis thaliana	56.52	4.00e-92	331.00
IUUC-Ago-007827	Ashbya gossypii	50.00	6.00e-82	297.00
IUUC-Acl-008205	Aspergillus clavatus	52.16	7.00e-82	296.00
IUUC-Afl-008748	Aspergillus flavus	51.47	1.00e-83	302.00
IUUC-Afu-008791	Aspergillus fumigatus	51.83	1.00e-81	296.00
IUUC-Ani-009152	Aspergillus nidulans	50.49	2.00e-83	302.00
IUUC-Ang-009765	Aspergillus niger	50.81	2.00e-83	301.00
IUUC-Aor-009927	Aspergillus oryzae	51.33	1.00e-80	293.00
IUUC-Ate-010248	Aspergillus terreus	51.79	2.00e-84	305.00
IUUC-Ame-011478	Astyanax mexicanus	93.44	8.00e-179	619.00
IUUC-Bgr-012276	Blumeria graminis	50.68	1.00e-80	292.00
IUUC-Bta-012700	Bos taurus	88.20	2.00e-169	587.00
IUUC-Bci-013722	Botrytis cinerea	50.17	6.00e-83	300.00
IUUC-Bdi-014818	Brachypodium distachyon	54.33	8.00e-93	333.00
IUUC-Bol-015779	Brassica oleracea	56.57	7.00e-92	330.00
IUUC-Bra-016973	Brassica rapa	56.42	5.00e-93	335.00
IUUC-Cel-018479	Caenorhabditis elegans	41.08	3.00e-67	248.00
IUUC-Cja-019956	Callithrix jacchus	88.19	1.00e-153	535.00
IUUC-Cfa-020752	Canis familiaris	88.51	8.00e-171	592.00
IUUC-Cpo-021871	Cavia porcellus	87.23	8.00e-168	582.00
IUUC-Cre-022797	Chlamydomonas reinhardtii	53.64	3.00e-95	341.00
IUUC-Csa-023393	Chlorocebus sabaeus	88.20	1.00e-170	592.00
IUUC-Cho-024786	Choloepus hoffmanni	68.94	6.00e-121	427.00
IUUC-Cin-025332	Ciona intestinalis	70.03	1.00e-132	466.00
IUUC-Csv-025926	Ciona savignyi	68.73	7.00e-129	453.00
IUUC-Cgl-026413	Colletotrichum gloeosporioides	51.54	2.00e-79	289.00
IUUC-Cne-027054	Cryptococcus neoformans	49.07	3.00e-78	285.00
IUUC-Cme-027165	Cyanidioschyzon merolae	34.24	1.00e-49	191.00
IUUC-Dno-029628	Dasypus novemcinctus	88.16	1.00e-169	589.00
IUUC-Dor-030650	Dipodomys ordii	71.34	1.00e-130	459.00
IUUC-Dse-031206	Dothistroma septosporum	48.24	2.00e-80	292.00
IUUC-Dme-031854	Drosophila melanogaster	59.60	1.00e-105	376.00
IUUC-Ete-032618	Echinops telfairi	61.06	3.00e-106	378.00
IUUC-Eca-033268	Equus caballus	88.79	3.00e-170	590.00
IUUC-Fca-035918	Felis catus	88.20	6.00e-170	589.00
IUUC-Fal-037551	Ficedula albicollis	88.24	4.00e-153	533.00
IUUC-Fox-037763	Fusarium oxysporum	50.00	6.00e-82	297.00
IUUC-Fso-038341	Fusarium solani	49.84	4.00e-81	294.00
IUUC-Gmo-038638	Gadus morhua	92.16	5.00e-178	616.00
IUUC-Ggr-039865	Gaeumannomyces graminis	49.00	6.00e-79	287.00
IUUC-Gga-040193	Gallus gallus	88.75	1.00e-172	598.00
IUUC-Gma-044311	Glycine max	55.37	4.00e-93	335.00
IUUC-Ggo-045252	Gorilla gorilla	87.89	5.00e-170	590.00
IUUC-Hsa-046565	Homo sapiens	87.58	2.00e-169	588.00
IUUC-Hvu-047835	Hordeum vulgare	54.46	3.00e-94	338.00
IUUC-Itr-048587	Ictidomys tridecemlineatus	87.54	2.00e-168	584.00
IUUC-Kpa-049148	Komagataella pastoris	51.66	3.00e-84	304.00
IUUC-Lch-050421	Latimeria chalumnae	91.25	8.00e-177	612.00
IUUC-Lpe-051187	Leersia perrieri	53.00	1.00e-93	338.00
IUUC-Loc-052167	Lepisosteus oculatus	93.17	5.00e-178	616.00
IUUC-Lma-053250	Leptosphaeria maculans	51.96	1.00e-81	296.00
IUUC-Laf-054304	Loxodonta africana	87.85	1.00e-168	585.00
IUUC-Mcc-055519	Macaca mulatta	87.89	6.00e-170	590.00
IUUC-Meu-056439	Macropus eugenii	89.06	2.00e-172	598.00
IUUC-Mor-057241	Magnaporthe oryzae	51.03	2.00e-79	288.00
IUUC-Mpo-057373	Magnaporthe poae	44.90	2.00e-64	238.00
IUUC-Mtr-058412	Medicago truncatula	54.70	2.00e-91	328.00
IUUC-Mla-058966	Melampsora laricipopulina	48.64	2.00e-85	308.00
IUUC-Mga-060066	Meleagris gallopavo	88.82	2.00e-164	571.00
IUUC-Mvi-060290	Microbotryum violaceum	46.48	2.00e-80	295.00
IUUC-Mmr-060717	Microcebus murinus	87.58	4.00e-169	587.00
IUUC-Mdo-062496	Monodelphis domestica	89.10	3.00e-173	600.00
IUUC-Mmu-063490	Mus musculus	87.58	1.00e-169	588.00
IUUC-Mac-065307	Musa acuminata	55.48	2.00e-90	325.00
IUUC-Mpu-066601	Mustela putorius furo	88.51	8.00e-171	592.00
IUUC-Mlu-067501	Myotis lucifugus	88.47	7.00e-170	589.00
IUUC-Nfi-068360	Neosartorya fischeri	50.75	4.00e-67	247.00
IUUC-Ncr-068928	Neurospora crassa	49.33	6.00e-82	297.00
IUUC-Nle-069028	Nomascus leucogenys	87.58	8.00e-170	589.00
IUUC-Opr-070446	Ochotona princeps	87.58	5.00e-161	560.00
IUUC-Ont-071587	Oreochromis niloticus	92.19	8.00e-178	615.00
IUUC-Oan-073211	Ornithorhynchus anatinus	87.23	5.00e-170	590.00
IUUC-Ocu-074306	Oryctolagus cuniculus	85.71	2.00e-165	574.00
IUUC-Oba-075069	Oryza barthii	53.80	4.00e-93	334.00
IUUC-Obr-076667	Oryza brachyantha	54.30	8.00e-94	336.00
IUUC-Ogl-077208	Oryza glaberrima	53.80	4.00e-93	334.00
IUUC-Ogu-078513	Oryza glumaepatula	53.80	4.00e-93	334.00
IUUC-Oin-079094	Oryza indica	53.80	4.00e-93	334.00
IUUC-Olo-080473	Oryza longistaminata	53.80	4.00e-93	334.00
IUUC-Ome-081643	Oryza meridionalis	53.80	4.00e-93	334.00
IUUC-Oni-082589	Oryza nivara	53.80	4.00e-93	334.00
IUUC-Opu-083677	Oryza punctata	53.80	4.00e-93	334.00
IUUC-Oru-084537	Oryza rufipogon	53.80	4.00e-93	334.00
IUUC-Osa-085449	Oryza sativa	53.80	4.00e-93	334.00
IUUC-Ola-087226	Oryzias latipes	92.50	6.00e-180	623.00
IUUC-Olu-087893	Ostreococcus lucimarinus	52.05	6.00e-79	287.00
IUUC-Oga-088837	Otolemur garnettii	87.89	3.00e-170	591.00
IUUC-Oar-089594	Ovis aries	88.51	4.00e-170	590.00
IUUC-Ptr-091132	Pan troglodytes	87.58	3.00e-169	587.00
IUUC-Psi-093568	Pelodiscus sinensis	88.56	2.00e-165	575.00
IUUC-Pma-094172	Petromyzon marinus	74.36	2.00e-66	244.00
IUUC-Pno-094955	Phaeosphaeria nodorum	50.99	3.00e-80	291.00
IUUC-Ppa-095578	Physcomitrella patens	56.29	6.00e-93	333.00
IUUC-Pfo-096063	Poecilia formosa	93.12	4.00e-180	623.00
IUUC-Pab-098674	Pongo abelii	87.89	2.00e-169	588.00
IUUC-Pop-099402	Populus trichocarpa	54.85	4.00e-93	334.00
IUUC-Pca-100824	Procavia capensis	69.88	1.00e-127	449.00
IUUC-Ppe-101707	Prunus persica	54.70	1.00e-90	327.00
IUUC-Pva-103161	Pteropus vampyrus	83.54	7.00e-161	560.00
IUUC-Pgr-103573	Puccinia graminis	51.70	2.00e-86	312.00
IUUC-Ptt-103700	Puccinia triticina	50.47	2.00e-79	288.00
IUUC-Pte-104267	Pyrenophora teres	50.34	3.00e-78	285.00
IUUC-Pyt-104535	Pyrenophora triticirepentis	49.66	6.00e-71	260.00
IUUC-Rno-104833	Rattus norvegicus	87.89	7.00e-170	589.00
IUUC-Sce-106437	Saccharomyces cerevisiae	49.35	7.00e-74	270.00
IUUC-Sha-106611	Sarcophilus harrisii	89.06	2.00e-172	598.00
IUUC-Sja-107654	Schizosaccharomyces japonicus	48.01	8.00e-79	286.00
IUUC-Spo-108362	Schizosaccharomyces pombe	49.83	2.00e-83	302.00
IUUC-Smo-109674	Selaginella moellendorffii	56.11	7.00e-96	343.00
IUUC-Sit-110132	Setaria italica	53.47	2.00e-93	335.00
IUUC-Sly-111852	Solanum lycopersicum	53.16	2.00e-88	318.00
IUUC-Stu-112195	Solanum tuberosum	53.49	5.00e-89	320.00
IUUC-Sbi-114229	Sorghum bicolor	53.49	2.00e-93	335.00
IUUC-Sre-114898	Sporisorium reilianum	49.28	2.00e-90	325.00
IUUC-Ssc-115995	Sus scrofa	88.08	1.00e-78	285.00
IUUC-Tgu-116793	Taeniopygia guttata	89.03	8.00e-161	559.00
IUUC-Tru-117797	Takifugu rubripes	93.73	1.00e-180	625.00
IUUC-Tsy-118967	Tarsius syrichta	96.36	2.00e-26	112.00
IUUC-Tni-120366	Tetraodon nigroviridis	92.19	4.00e-177	613.00
IUUC-Tca-121068	Theobroma cacao	54.79	7.00e-91	327.00
IUUC-Tre-121899	Trichoderma reesei	49.34	8.00e-82	296.00
IUUC-Tvi-122380	Trichoderma virens	49.83	2.00e-82	298.00
IUUC-Tae-123998	Triticum aestivum	55.48	2.00e-95	342.00
IUUC-Tur-126202	Triticum urartu	54.82	2.00e-94	338.00
IUUC-Tme-127181	Tuber melanosporum	52.60	4.00e-88	318.00
IUUC-Ttr-128448	Tursiops truncatus	76.40	4.00e-142	497.00
IUUC-Uma-129661	Ustilago maydis	48.99	1.00e-90	326.00
IUUC-Vda-129666	Verticillium dahliae	51.54	4.00e-79	287.00
IUUC-Vpa-130318	Vicugna pacos	88.20	3.00e-170	590.00
IUUC-Vvi-130868	Vitis vinifera	54.18	9.00e-92	330.00
IUUC-Xtr-131859	Xenopus tropicalis	88.75	3.00e-171	594.00
IUUC-Xma-133898	Xiphophorus maculatus	93.12	2.00e-180	624.00
IUUC-Yli-134559	Yarrowia lipolytica	52.04	1.00e-81	296.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence