iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Apl-003202

Ensembl Protein ID

ENSAPLP00000009429.1

UniProt Accession

U3IQA6; U3IQA6_ANAPL

Genbank Protein ID

ENSAPLP00000009429

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

ADON01000274

Gene Name

ERCC8

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSAPLG00000009673.1	ENSAPLT00000010121.1	ENSAPLP00000009429.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.10e-27	93.2	184	218
UBD/Beta-Prp	1.90e-44	151.7	42	231

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sd.tllvsGsdDgtikvWDlrt 32
           gH  +v ++++      +l+++s D ++k+WD+r+
   Q: 184  GHRQEVLAVSWspRHeYILATASADSKVKLWDVRR 218
           8**********97334779*************986 PP

UBD/Beta-Prp

   S: 51   heaevtavkfspdgk.ilvtgseDrtikvwdls........tgkcvhtlk.......ghedsvlslsfsp.sgdklvsGshdrtirvwd 122
           h +++++++++p +  ++++g++D++i v+dl+        t+k v   +        h +sv +++++p ++  + s s d+t+++wd
   Q: 42   HGNGINSLDIEPVEGrYMLSGGSDGVIVVYDLEnlsrkptyTCKAVC--SvgrshpdVHRFSVETVQWYPhDTGMFTSSSFDKTLKIWD 128
           55567777777765556677777777777776666555533222222..2445566666677777777775557777777777777777 PP
   S: 123  letgqclee.tlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsng.kelvsgsldgtvklwdl 209
           ++t q      ++g+  +  +  +  + +l++ G++  +v+l dlk+g++ + l+g h + v  +s+++     l+++s d++vklwd+
   Q: 129  TNTLQIADVfHFEGTVYSHHMSPIATKHCLVAVGTKSPKVQLCDLKSGSCSHILQG-HRQEVLAVSWSPRHeYILATASADSKVKLWDV 216
           77776665322222222222333333336777777777777777777777777776.77777777777666344556677777777777 PP
   S: 210  q.tgecvrtlnghtd 223
           + ++ c+ tl  h+ 
   Q: 217  RrASGCLTTLDQHNG 231
           764446777666664 PP

Organism

Anas platyrhynchos

Protein Sequence
(Fasta)

KSNFGEKRKK DGNGLDALRR GENMIRVLSL ELNKDRDVER IHGNGINSLD IEPVEGRYML 60
SGGSDGVIVV YDLENLSRKP TYTCKAVCSV GRSHPDVHRF SVETVQWYPH DTGMFTSSSF 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AAGTCTAATT TTGGGGAAAA AAGAAAAAAA GATGGGAATG GGTTAGATGC ATTGAGGAGG 60
GGTGAAAATA TGATTTAAGC TGTTTATAAC TACATAGCAA TGTTTTAAAG ATCTGTTGTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0031464--C:Cul4A-RING E3 ubiquitin ligase complex
GO:0016363--C:nuclear matrix
GO:0000109--C:nucleotide-excision repair complex
GO:0004842--F:ubiquitin-protein transferase activity
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0051865--P:protein autoubiquitination
GO:0000209--P:protein polyubiquitination
GO:0006979--P:response to oxidative stress
GO:0009411--P:response to UV
GO:0010165--P:response to X-ray
GO:0006283--P:transcription-coupled nucleotide-excision repair

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001170	Aegilops tauschii	32.31	2.00e-41	164.00
IUUC-Aml-002201	Ailuropoda melanoleuca	80.36	0.00e+00	654.00
IUUC-Atr-002784	Amborella trichopoda	40.28	2.00e-42	166.00
IUUC-Aca-004708	Anolis carolinensis	81.07	7.00e-168	582.00
IUUC-Aly-006144	Arabidopsis lyrata	35.38	4.00e-72	265.00
IUUC-Ath-006673	Arabidopsis thaliana	41.43	9.00e-47	180.00
IUUC-Acl-008195	Aspergillus clavatus	38.29	5.00e-42	164.00
IUUC-Afl-008406	Aspergillus flavus	38.10	2.00e-39	156.00
IUUC-Afu-008759	Aspergillus fumigatus	36.06	1.00e-39	157.00
IUUC-Ani-009380	Aspergillus nidulans	37.27	8.00e-40	157.00
IUUC-Ang-009820	Aspergillus niger	33.14	2.00e-38	152.00
IUUC-Aor-010092	Aspergillus oryzae	38.29	6.00e-44	171.00
IUUC-Ate-010491	Aspergillus terreus	37.86	6.00e-44	171.00
IUUC-Bta-012825	Bos taurus	81.32	0.00e+00	658.00
IUUC-Bci-013856	Botrytis cinerea	33.24	5.00e-55	208.00
IUUC-Bdi-014899	Brachypodium distachyon	31.35	2.00e-57	216.00
IUUC-Bol-015337	Brassica oleracea	35.31	5.00e-70	258.00
IUUC-Bra-018089	Brassica rapa	34.81	2.00e-69	256.00
IUUC-Cja-018725	Callithrix jacchus	80.53	0.00e+00	650.00
IUUC-Cfa-021162	Canis familiaris	80.10	0.00e+00	654.00
IUUC-Cpo-022190	Cavia porcellus	80.00	0.00e+00	650.00
IUUC-Cre-022960	Chlamydomonas reinhardtii	32.77	2.00e-39	156.00
IUUC-Csa-023610	Chlorocebus sabaeus	81.32	0.00e+00	658.00
IUUC-Cho-024689	Choloepus hoffmanni	80.05	0.00e+00	631.00
IUUC-Cin-025324	Ciona intestinalis	42.50	5.00e-83	300.00
IUUC-Csv-026059	Ciona savignyi	39.35	2.00e-74	272.00
IUUC-Cgl-026384	Colletotrichum gloeosporioides	36.08	3.00e-41	162.00
IUUC-Cme-027182	Cyanidioschyzon merolae	28.66	4.00e-14	72.80
IUUC-Dre-028696	Danio rerio	74.62	4.00e-176	610.00
IUUC-Dno-029102	Dasypus novemcinctus	80.62	0.00e+00	662.00
IUUC-Dor-030361	Dipodomys ordii	65.79	1.00e-144	505.00
IUUC-Dse-031167	Dothistroma septosporum	31.01	2.00e-45	176.00
IUUC-Ete-032856	Echinops telfairi	66.41	2.00e-148	518.00
IUUC-Eca-033611	Equus caballus	81.71	4.00e-171	593.00
IUUC-Eeu-034583	Erinaceus europaeus	60.21	1.00e-128	452.00
IUUC-Fca-036481	Felis catus	80.00	0.00e+00	648.00
IUUC-Fal-037327	Ficedula albicollis	89.09	0.00e+00	645.00
IUUC-Fox-037684	Fusarium oxysporum	32.79	1.00e-45	177.00
IUUC-Fso-038306	Fusarium solani	34.38	2.00e-55	209.00
IUUC-Gmo-039043	Gadus morhua	72.37	6.00e-167	579.00
IUUC-Ggr-039783	Gaeumannomyces graminis	29.63	1.00e-39	157.00
IUUC-Gga-041085	Gallus gallus	90.53	0.00e+00	640.00
IUUC-Gac-042328	Gasterosteus aculeatus	70.59	2.00e-159	554.00
IUUC-Gma-043004	Glycine max	35.00	3.00e-61	228.00
IUUC-Ggo-045627	Gorilla gorilla	74.22	5.00e-171	593.00
IUUC-Hsa-046028	Homo sapiens	81.32	0.00e+00	658.00
IUUC-Hvu-047678	Hordeum vulgare	33.96	2.00e-39	155.00
IUUC-Itr-048648	Ictidomys tridecemlineatus	80.53	0.00e+00	656.00
IUUC-Kpa-049386	Komagataella pastoris	32.48	1.00e-44	174.00
IUUC-Lch-050590	Latimeria chalumnae	78.40	8.00e-153	532.00
IUUC-Lpe-051725	Leersia perrieri	35.41	5.00e-41	161.00
IUUC-Loc-051788	Lepisosteus oculatus	77.44	0.00e+00	631.00
IUUC-Lma-053082	Leptosphaeria maculans	34.65	2.00e-55	209.00
IUUC-Laf-053809	Loxodonta africana	81.40	0.00e+00	668.00
IUUC-Mcc-054998	Macaca mulatta	85.28	1.00e-137	482.00
IUUC-Meu-055929	Macropus eugenii	83.48	5.00e-174	603.00
IUUC-Mor-057003	Magnaporthe oryzae	36.64	3.00e-48	186.00
IUUC-Mtr-057921	Medicago truncatula	33.18	6.00e-60	224.00
IUUC-Mga-059449	Meleagris gallopavo	70.67	7.00e-131	459.00
IUUC-Mmr-061609	Microcebus murinus	77.69	2.00e-179	620.00
IUUC-Mdo-062564	Monodelphis domestica	82.23	0.00e+00	682.00
IUUC-Mmu-063904	Mus musculus	81.05	0.00e+00	649.00
IUUC-Mac-064716	Musa acuminata	38.92	1.00e-41	164.00
IUUC-Mpu-066617	Mustela putorius furo	80.10	0.00e+00	658.00
IUUC-Mlu-067054	Myotis lucifugus	80.36	0.00e+00	659.00
IUUC-Nfi-068467	Neosartorya fischeri	36.90	1.00e-34	140.00
IUUC-Nle-069731	Nomascus leucogenys	81.32	0.00e+00	658.00
IUUC-Opr-070297	Ochotona princeps	58.90	1.00e-67	249.00
IUUC-Ont-072558	Oreochromis niloticus	73.15	2.00e-164	571.00
IUUC-Oan-072864	Ornithorhynchus anatinus	92.98	1.00e-28	116.00
IUUC-Ocu-074415	Oryctolagus cuniculus	82.11	0.00e+00	667.00
IUUC-Oba-075759	Oryza barthii	38.32	4.00e-45	175.00
IUUC-Obr-076387	Oryza brachyantha	30.11	3.00e-51	195.00
IUUC-Ogl-077924	Oryza glaberrima	42.22	1.00e-20	92.40
IUUC-Ogu-078186	Oryza glumaepatula	35.29	3.00e-66	245.00
IUUC-Oin-079389	Oryza indica	35.47	8.00e-50	190.00
IUUC-Olo-080916	Oryza longistaminata	29.41	3.00e-17	80.90
IUUC-Ome-081471	Oryza meridionalis	39.69	1.00e-41	163.00
IUUC-Oni-082449	Oryza nivara	37.85	3.00e-42	166.00
IUUC-Opu-083210	Oryza punctata	33.25	5.00e-61	228.00
IUUC-Oru-085159	Oryza rufipogon	38.32	2.00e-45	176.00
IUUC-Osa-085926	Oryza sativa	42.57	6.00e-35	139.00
IUUC-Ola-087084	Oryzias latipes	72.09	2.00e-167	581.00
IUUC-Olu-087853	Ostreococcus lucimarinus	30.61	9.00e-42	163.00
IUUC-Oga-089008	Otolemur garnettii	80.53	0.00e+00	667.00
IUUC-Oar-089259	Ovis aries	81.05	0.00e+00	654.00
IUUC-Ptr-091112	Pan troglodytes	81.32	0.00e+00	659.00
IUUC-Pan-092303	Papio anubis	75.00	1.00e-55	207.00
IUUC-Psi-093050	Pelodiscus sinensis	86.52	0.00e+00	686.00
IUUC-Pma-094259	Petromyzon marinus	56.35	7.00e-121	426.00
IUUC-Pno-094798	Phaeosphaeria nodorum	32.24	3.00e-52	198.00
IUUC-Ppa-095477	Physcomitrella patens	40.27	9.00e-47	180.00
IUUC-Pfo-096855	Poecilia formosa	70.91	1.00e-164	572.00
IUUC-Pab-098096	Pongo abelii	80.79	0.00e+00	652.00
IUUC-Pop-098800	Populus trichocarpa	32.27	3.00e-68	251.00
IUUC-Pca-100187	Procavia capensis	84.69	8.00e-97	346.00
IUUC-Ppe-101759	Prunus persica	39.07	5.00e-45	174.00
IUUC-Pva-102438	Pteropus vampyrus	87.76	4.00e-77	281.00
IUUC-Pte-104197	Pyrenophora teres	34.66	1.00e-53	203.00
IUUC-Pyt-104421	Pyrenophora triticirepentis	35.11	3.00e-52	198.00
IUUC-Rno-106087	Rattus norvegicus	79.47	0.00e+00	642.00
IUUC-Sce-106276	Saccharomyces cerevisiae	24.23	2.00e-12	66.60
IUUC-Sha-106831	Sarcophilus harrisii	78.48	0.00e+00	654.00
IUUC-Sja-107681	Schizosaccharomyces japonicus	35.14	4.00e-54	204.00
IUUC-Spo-108294	Schizosaccharomyces pombe	38.18	7.00e-66	243.00
IUUC-Ssl-108613	Sclerotinia sclerotiorum	32.95	4.00e-53	201.00
IUUC-Smo-109008	Selaginella moellendorffii	39.24	2.00e-74	272.00
IUUC-Sit-110300	Setaria italica	33.49	1.00e-60	226.00
IUUC-Sly-111441	Solanum lycopersicum	35.28	6.00e-64	237.00
IUUC-Stu-111995	Solanum tuberosum	34.55	4.00e-64	238.00
IUUC-Sar-113196	Sorex araneus	71.10	8.00e-110	389.00
IUUC-Sbi-113790	Sorghum bicolor	30.92	4.00e-46	178.00
IUUC-Ssc-115609	Sus scrofa	81.58	0.00e+00	664.00
IUUC-Tgu-116927	Taeniopygia guttata	88.95	0.00e+00	703.00
IUUC-Tru-118164	Takifugu rubripes	72.19	5.00e-172	596.00
IUUC-Tsy-119151	Tarsius syrichta	74.21	1.00e-173	602.00
IUUC-Tni-120896	Tetraodon nigroviridis	71.43	8.00e-163	566.00
IUUC-Tca-121592	Theobroma cacao	38.86	3.00e-45	175.00
IUUC-Tre-122023	Trichoderma reesei	36.68	1.00e-49	190.00
IUUC-Tvi-122507	Trichoderma virens	37.42	3.00e-51	195.00
IUUC-Tae-125276	Triticum aestivum	32.08	2.00e-47	182.00
IUUC-Tur-126092	Triticum urartu	32.59	1.00e-39	156.00
IUUC-Tbe-127422	Tupaia belangeri	61.73	6.00e-130	456.00
IUUC-Ttr-129097	Tursiops truncatus	80.10	0.00e+00	651.00
IUUC-Vda-130014	Verticillium dahliae	37.66	2.00e-49	189.00
IUUC-Vpa-130782	Vicugna pacos	80.10	0.00e+00	660.00
IUUC-Vvi-131494	Vitis vinifera	37.91	5.00e-45	174.00
IUUC-Xtr-132165	Xenopus tropicalis	80.00	2.00e-178	617.00
IUUC-Xma-133205	Xiphophorus maculatus	71.35	4.00e-167	580.00
IUUC-Yli-134614	Yarrowia lipolytica	35.47	1.00e-53	203.00
IUUC-Zma-135861	Zea mays	35.12	3.00e-64	238.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence