iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sit-110812

Ensembl Protein ID

Si017157m

UniProt Accession

K3YSB3; K3YSB3_SETIT

Genbank Protein ID

KQL29675.1

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

CM003528

Gene Name

LOC101784755; SETIT_017157mg

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Si017157m.g	Si017157m	Si017157m

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	5.70e-32	110.6	78	150

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceenss 74
           vpe+flCpIs e+MrdPvvl+sG+tydr+ I++wl  g++tcP t+q l+++ l+Pn+ +r++i++wc +n++
   Q: 78   VPEQFLCPISSEIMRDPVVLASGQTYDRRFIQEWLGAGNRTCPQTQQVLSNTILIPNHLVRSMISQWCTDNGI 150
           8********************************************************************9986 PP

Organism

Setaria italica

Protein Sequence
(Fasta)

MAKPTPVASA EEAAALRRRL RRLVAAVAAG SADAEAFDEA AEALAKLRDA ELGPRKDRAG 60
AGGGGGGVNK GGAEAAVVPE QFLCPISSEI MRDPVVLASG QTYDRRFIQE WLGAGNRTCP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TCCGGCCCTC CCCTTCTCCT TAACCCTCTC CCTCGCCTCC ACCACCACCG CTTCATCCCC 60
TCCACCTCTT CCTCTCCCCC CGAGGAGGCC GCCGCTCCCA TGCCCGCCGG CGCCCGGCCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF00514--Arm
PF04564--U-box

SMART

SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

KEGG

sita:101784755

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-006420	Arabidopsis lyrata	51.02	7.00e-112	396.00
IUUC-Ath-007457	Arabidopsis thaliana	50.89	2.00e-112	398.00
IUUC-Bdi-014069	Brachypodium distachyon	83.76	0.00e+00	640.00
IUUC-Bol-016297	Brassica oleracea	49.48	7.00e-105	373.00
IUUC-Bra-017759	Brassica rapa	49.74	1.00e-104	372.00
IUUC-Gma-043611	Glycine max	50.78	5.00e-107	380.00
IUUC-Lpe-050825	Leersia perrieri	82.69	0.00e+00	634.00
IUUC-Mtr-057877	Medicago truncatula	47.91	2.00e-102	365.00
IUUC-Mac-065616	Musa acuminata	65.38	1.00e-143	502.00
IUUC-Oba-075311	Oryza barthii	83.60	4.00e-178	616.00
IUUC-Obr-076232	Oryza brachyantha	81.18	7.00e-175	605.00
IUUC-Ogl-077647	Oryza glaberrima	84.06	0.00e+00	647.00
IUUC-Ogu-078448	Oryza glumaepatula	84.06	0.00e+00	646.00
IUUC-Oin-079693	Oryza indica	83.60	7.00e-178	615.00
IUUC-Olo-080462	Oryza longistaminata	83.90	0.00e+00	641.00
IUUC-Ome-081796	Oryza meridionalis	83.85	0.00e+00	635.00
IUUC-Oni-082158	Oryza nivara	84.06	0.00e+00	646.00
IUUC-Opu-084131	Oryza punctata	83.90	0.00e+00	642.00
IUUC-Oru-084335	Oryza rufipogon	84.06	0.00e+00	646.00
IUUC-Osa-085556	Oryza sativa	84.06	0.00e+00	646.00
IUUC-Pop-099087	Populus trichocarpa	52.86	8.00e-110	389.00
IUUC-Ppe-101662	Prunus persica	54.95	3.00e-117	414.00
IUUC-Sly-110911	Solanum lycopersicum	51.31	6.00e-115	406.00
IUUC-Stu-112732	Solanum tuberosum	51.83	9.00e-116	409.00
IUUC-Sbi-114814	Sorghum bicolor	89.74	0.00e+00	710.00
IUUC-Tca-121080	Theobroma cacao	53.73	7.00e-120	423.00
IUUC-Vvi-131590	Vitis vinifera	53.73	2.00e-121	428.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence