iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sit-110396

Ensembl Protein ID

Si019054m

UniProt Accession

K3YXQ8; K3YXQ8_SETIT

Genbank Protein ID

KQL30840.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM003528

Gene Name

SETIT_019054mg

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Si019054m.g	Si019054m	Si019054m

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.10e-08	35.1	2567	2600

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrt 32
           gH ++vtcla+  d ++lv+Gs+D t+ +W++r+
   Q: 2567 GHLAPVTCLALsADsNYLVTGSRDTTVILWRIRQ 2600
           8***********555****************876 PP

Organism

Setaria italica

Protein Sequence
(Fasta)

RRHFFAFPAR PLLLSLPPPL GARPRPCTAP PPLISREHFP KTPTSLLPFG DEAYAVNDEE 60
VSDTEMSACS PSAPSEPSPP LRRRLAPVVA SDVPEEVVRA VDAVIMGGGV EHLREMVSEE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CGACGCCATT TCTTCGCGTT CCCCGCTCGG CCGCTTCTTC TCTCTCTTCC TCCGCCTCTC 60
GGGGCACGCC CACGCCCATG CACCGCGCCA CCACCACTAA TCTCGCGCGA GCATTTTCCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR000409--BEACH_dom
IPR013320--ConA-like_dom
IPR031570--DUF4704
IPR023362--PH-BEACH_dom
IPR011993--PH_dom-like
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50197--BEACH
PS51783--PH_BEACH
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF02138--Beach
PF15787--DUF4704
PF14844--PH_BEACH
PF00400--WD40

SMART

SM01026--Beach
SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Lpe-051602	Leersia perrieri	75.20	0.00e+00	3770.00
IUUC-Oba-075819	Oryza barthii	77.53	0.00e+00	3869.00
IUUC-Obr-076035	Oryza brachyantha	73.31	0.00e+00	3709.00
IUUC-Ogl-077738	Oryza glaberrima	75.96	0.00e+00	3828.00
IUUC-Ogu-077967	Oryza glumaepatula	76.79	0.00e+00	3922.00
IUUC-Oin-079420	Oryza indica	76.46	0.00e+00	3868.00
IUUC-Oni-082483	Oryza nivara	77.10	0.00e+00	3916.00
IUUC-Opu-083783	Oryza punctata	73.21	0.00e+00	3729.00
IUUC-Oru-085097	Oryza rufipogon	75.97	0.00e+00	3806.00
IUUC-Osa-085661	Oryza sativa	75.17	0.00e+00	2836.00
IUUC-Tae-123435	Triticum aestivum	72.41	0.00e+00	1623.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence