iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114146

UUCD1 version

UUC-SoB-00043

Ensembl Protein ID

Sb06g025730.2

UniProt Accession

A0A1B6PMQ7; A0A1B6PMQ7_SORBI

Genbank Protein ID

KXG26933.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000765

Gene Name

SORBI_006G183000

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb06g025730	Sb06g025730.1	Sb06g025730.1
Sb06g025730	Sb06g025730.2	Sb06g025730.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.40e-07	32.7	269	310

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C+iCl+ ++dg  ++ lpCgH+fh +C+ kw         +++CPlC+
   Q: 269  CCICLSAYDDGaeLRELPCGHHFHCTCIDKW------LHINATCPLCK 310
           ********88766889***************......**********7 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MREPSVLVRE AAAEHLEERQ ADWAYSRPVV ALDLLWNLAF ITVAAVVLVL SRDEDSPMPL 60
RTWVAGYALQ CVVHMVCVAI EYRMRHGQGG GAGAAPTDEE RGSDGSSSSS DDDDREFDRH 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCATGCGGGA ACCCTCGGTG CTGGTGCGGG AGGCAGCCGC AGAGCACCTC GAGGAGCGGC 60
AGGCTGACTG GGCCTACTCC CGCCCCGTCG TGGCGCTCGA CCTGCTCTGG AACCTCGCCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000315	Aegilops tauschii	86.94	6.00e-106	375.00
IUUC-Aly-005465	Arabidopsis lyrata	62.80	8.00e-93	332.00
IUUC-Bdi-014813	Brachypodium distachyon	81.54	8.00e-120	422.00
IUUC-Bra-018052	Brassica rapa	64.87	4.00e-98	350.00
IUUC-Gma-043453	Glycine max	65.33	2.00e-103	367.00
IUUC-Hvu-047150	Hordeum vulgare	83.08	6.00e-132	462.00
IUUC-Lpe-051532	Leersia perrieri	81.23	7.00e-118	416.00
IUUC-Mtr-058719	Medicago truncatula	64.83	4.00e-100	357.00
IUUC-Oba-075346	Oryza barthii	81.23	7.00e-125	439.00
IUUC-Obr-076817	Oryza brachyantha	91.42	8.00e-106	375.00
IUUC-Ogl-077875	Oryza glaberrima	88.31	1.00e-140	491.00
IUUC-Ogu-078301	Oryza glumaepatula	87.08	7.00e-138	482.00
IUUC-Oin-079892	Oryza indica	86.19	2.00e-107	380.00
IUUC-Olo-080611	Oryza longistaminata	86.43	9.00e-109	387.00
IUUC-Ome-081780	Oryza meridionalis	89.21	2.00e-143	503.00
IUUC-Oni-082775	Oryza nivara	92.00	8.00e-140	489.00
IUUC-Opu-083495	Oryza punctata	81.85	6.00e-119	419.00
IUUC-Oru-085043	Oryza rufipogon	92.00	8.00e-140	489.00
IUUC-Osa-085935	Oryza sativa	87.66	4.00e-130	456.00
IUUC-Ppe-101951	Prunus persica	64.53	2.00e-97	348.00
IUUC-Smo-109643	Selaginella moellendorffii	59.26	9.00e-88	315.00
IUUC-Sit-110742	Setaria italica	97.23	1.00e-151	528.00
IUUC-Tae-124699	Triticum aestivum	87.31	8.00e-140	488.00
IUUC-Tur-126321	Triticum urartu	82.10	3.00e-131	460.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence