iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0014s07290	POPTR_0014s07290.3	POPTR_0014s07290.3
POPTR_0014s07290	POPTR_0014s07290.1	POPTR_0014s07290.1
POPTR_0014s07290	POPTR_0014s07290.2	POPTR_0014s07290.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	2.00e-09	38.9	87	129

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           C+iCl ++  k+ ++++p CgH fh++C+  w       +k+ +CP+Cr
   Q: 87   CSICLGEYqeKEVLRIMPkCGHNFHLSCIDEW------LRKHSTCPVCR 129
           ********65555888999*************......**********8 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MFDAAMNLTT TVIGFGMSVT FIVFVCTRII CGRLRGAESR QMLEIESRID IEQPEHGISG 60
LEPVLVAAIP TLRFTREAFS SAEDAQCSIC LGEYQEKEVL RIMPKCGHNF HLSCIDEWLR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTATTCAACT CTTGTCATTT CTTGATGAAT CCTTATCTGG GGTCATTGTT AATTGTTACG 60
GTCTTTGTTT ATTTTGTTTC TTGTCTTGTC ATCTTTTCTT TAGTATTTTT TAGCTTGCGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

pop:POPTR_0014s07290g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001181	Aegilops tauschii	53.39	6.00e-33	134.00
IUUC-Bdi-014570	Brachypodium distachyon	46.57	8.00e-45	172.00
IUUC-Cin-025662	Ciona intestinalis	35.71	1.00e-12	67.00
IUUC-Kpa-049389	Komagataella pastoris	37.18	2.00e-10	59.30
IUUC-Mtr-057883	Medicago truncatula	57.73	2.00e-59	221.00
IUUC-Oba-075171	Oryza barthii	46.97	2.00e-46	177.00
IUUC-Obr-076241	Oryza brachyantha	51.06	6.00e-50	189.00
IUUC-Ogl-076928	Oryza glaberrima	41.49	1.00e-30	125.00
IUUC-Ogu-078077	Oryza glumaepatula	46.97	1.00e-46	178.00
IUUC-Oin-079905	Oryza indica	46.97	1.00e-46	178.00
IUUC-Olo-080843	Oryza longistaminata	41.49	1.00e-30	125.00
IUUC-Ome-081424	Oryza meridionalis	46.46	2.00e-46	178.00
IUUC-Oni-082602	Oryza nivara	46.97	1.00e-46	178.00
IUUC-Opu-083909	Oryza punctata	47.47	3.00e-45	174.00
IUUC-Oru-084703	Oryza rufipogon	47.94	4.00e-46	177.00
IUUC-Osa-085851	Oryza sativa	46.97	1.00e-46	178.00
IUUC-Ppe-102002	Prunus persica	69.89	1.00e-76	278.00
IUUC-Sit-110325	Setaria italica	44.28	8.00e-45	172.00
IUUC-Sly-110894	Solanum lycopersicum	64.44	6.00e-66	242.00
IUUC-Tca-120974	Theobroma cacao	67.84	1.00e-80	291.00
IUUC-Tae-123359	Triticum aestivum	47.21	5.00e-44	169.00
IUUC-Tur-126495	Triticum urartu	42.46	4.00e-39	154.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence