iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114154

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000763

Gene Name

SORBI_004G326000

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb04g035570	Sb04g035570.1	Sb04g035570.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.30e-06	29.6	125	167

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+Cl++f  +d++++lp C H+fh++C+  w         + +CPlCr
   Q: 125  CAVCLCEFspDDQLRLLPkCSHAFHLECIDTW------LLSHSTCPLCR 167
           ******9999888*******************......89999*****8 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MSGGNSSWLM PPSPPAPAAS ALDNVETKIS PSIVLIVAIL AIVFFVCGLL HLLVRHLLRL 60
RRRRRRARED ADSVTAFQGQ LQQLFHLHDA GVDQAFIDAL PVFLYRNVVG GAGDGHGEGK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTTTCTTTTG TTGCGTCGCT CCACCACCAC CACCACCACC TGCCCCCGGC CCTCGAAAAA 60
GCTCAAGAAT TCGAGGACTC TTCCTCCTCT TGCTGCTTCC CCTCCTCCAC GATGCCCATG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

sbi:SORBI_04g035570

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000746	Aegilops tauschii	50.00	3.00e-55	207.00
IUUC-Atr-002500	Amborella trichopoda	36.90	5.00e-49	187.00
IUUC-Aly-005920	Arabidopsis lyrata	36.34	2.00e-45	176.00
IUUC-Ath-007441	Arabidopsis thaliana	40.20	5.00e-47	181.00
IUUC-Bdi-014892	Brachypodium distachyon	60.31	2.00e-83	301.00
IUUC-Hvu-047745	Hordeum vulgare	70.52	7.00e-110	389.00
IUUC-Lpe-051104	Leersia perrieri	59.78	5.00e-74	270.00
IUUC-Oba-075565	Oryza barthii	64.37	4.00e-107	380.00
IUUC-Obr-076645	Oryza brachyantha	74.00	3.00e-124	437.00
IUUC-Ogl-077503	Oryza glaberrima	68.48	4.00e-120	424.00
IUUC-Ogu-078420	Oryza glumaepatula	68.25	1.00e-120	425.00
IUUC-Oin-079414	Oryza indica	68.25	8.00e-120	422.00
IUUC-Olo-080854	Oryza longistaminata	69.40	3.00e-69	254.00
IUUC-Ome-082001	Oryza meridionalis	73.49	8.00e-126	442.00
IUUC-Oni-082887	Oryza nivara	68.48	2.00e-121	428.00
IUUC-Opu-083856	Oryza punctata	72.09	2.00e-108	385.00
IUUC-Oru-084923	Oryza rufipogon	71.00	8.00e-123	432.00
IUUC-Osa-085656	Oryza sativa	68.48	6.00e-120	423.00
IUUC-Sit-110646	Setaria italica	82.31	6.00e-150	523.00
IUUC-Stu-112868	Solanum tuberosum	39.86	6.00e-66	244.00
IUUC-Tae-125066	Triticum aestivum	67.03	1.00e-93	335.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence