iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Ppa-095985

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Predicted protein

Genbank Nucleotide ID

DS545258

Gene Name

PHYPADRAFT_152565

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PP1S371_17V6	PP1S371_17V6.1	PP1S371_17V6.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.90e-26	90.8	203	232
UBD/Beta-Prp	1.80e-43	149.6	156	423

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWD 29
           H+  +t+++f ++ t+l+++s D+t++vWD
   Q: 203  HSLLITDVRFsPGsTRLATSSFDKTVRVWD 232
           77789******888**************** PP

UBD/Beta-Prp

   S: 3    ktlkghhksvitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgk.cvhtlkgheds 96
           ++l+++ ++v++  +fs d++lla+++ d++  +w+++  kl +sl++h+  +t+v+fsp +  l+t+s D+t++vwd +++   ++t++gh+ s
   Q: 156  TCLRASTSKVVC-CHFSSDGKLLASAGHDKKAVLWNMDALKLKSSLEEHSLLITDVRFSPGSTRLATSSFDKTVRVWDADSPNySLRTFTGHQTS 249
           677788888888.7899**************************************************************97652699******** PP
   S: 97   vlslsfsp.sgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfds 190
           v+sl+f+p + d l s + d+ ir w++++g c + +++g +   + ++++p    l ++++ ++v ++d++++++++tl+  ht++v+s+ +d 
   Q: 250  VMSLDFHPtNEDLLCSCDGDSEIRYWNVSQGVCTR-VFKGGM---TQMRFQPRYGRLLAAAAENVVSIFDVESETCVHTLQR-HTKPVHSVCWDA 339
           ********555***********************9.887776...999****9999999**********************9.*********777 PP
   S: 191  ng..........................kelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsiriW 249
           +g                          ++l+ +++ ++++lw++ +++  +t+ +h+  +  ++ s  +  ++s+s+D+++r+W
   Q: 340  SGdfvgecvhelscngnkfhscvfhpnyPSLLVIGCYQSLELWNMVEKQ-SMTVPAHEGLIAALASSAATGMVASASHDKTVRLW 423
           7777777777777777777777777777*****************9886.99********************************* PP

Organism

Physcomitrella patens

Protein Sequence
(Fasta)

MAIVYELELV VYCLAERAAV RVAPSARKRK QPASFSGPAN STGTANTEGP NSAPSTPSTH 60
TPGDVMSMAG ALQHSGSTSK PLLMYGADGT GPLASPSNQL ADMDRFGEDG SLDDNVESFL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCGATAG TATACGAGCT TGAATTAGTC GTGTACTGTT TGGCTGAAAG GGCAGGTTTG 60
ATCGTCATAC AAACATACAA CATAAGAACG CCTCACCTTA TAATGTGTGT GGGTTGGGCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

KEGG

ppp:PHYPADRAFT_152565

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000776	Aegilops tauschii	59.69	4.00e-127	448.00
IUUC-Atr-002717	Amborella trichopoda	65.87	1.00e-145	509.00
IUUC-Aly-006446	Arabidopsis lyrata	64.20	6.00e-146	510.00
IUUC-Ath-006594	Arabidopsis thaliana	63.81	2.00e-145	508.00
IUUC-Bdi-014855	Brachypodium distachyon	60.14	1.00e-133	470.00
IUUC-Bol-016368	Brassica oleracea	64.05	4.00e-149	521.00
IUUC-Bra-017481	Brassica rapa	64.29	1.00e-150	526.00
IUUC-Gma-043858	Glycine max	67.14	1.00e-155	543.00
IUUC-Hvu-047358	Hordeum vulgare	60.14	6.00e-135	473.00
IUUC-Lpe-051527	Leersia perrieri	61.26	3.00e-137	483.00
IUUC-Mtr-058613	Medicago truncatula	64.15	1.00e-149	523.00
IUUC-Mac-064770	Musa acuminata	63.76	2.00e-147	515.00
IUUC-Oba-075999	Oryza barthii	59.76	2.00e-136	479.00
IUUC-Obr-076847	Oryza brachyantha	57.83	9.00e-130	456.00
IUUC-Ogl-076931	Oryza glaberrima	59.76	1.00e-136	479.00
IUUC-Ogu-077963	Oryza glumaepatula	59.04	1.00e-131	462.00
IUUC-Oin-079144	Oryza indica	59.76	4.00e-136	478.00
IUUC-Olo-080956	Oryza longistaminata	59.47	2.00e-135	476.00
IUUC-Ome-081723	Oryza meridionalis	59.04	3.00e-131	462.00
IUUC-Oni-083067	Oryza nivara	59.28	2.00e-135	475.00
IUUC-Opu-083429	Oryza punctata	59.76	4.00e-136	478.00
IUUC-Oru-084534	Oryza rufipogon	59.04	1.00e-131	462.00
IUUC-Osa-085788	Oryza sativa	59.52	8.00e-136	477.00
IUUC-Pop-098994	Populus trichocarpa	67.67	4.00e-158	551.00
IUUC-Ppe-102018	Prunus persica	66.43	5.00e-155	541.00
IUUC-Smo-108724	Selaginella moellendorffii	75.66	9.00e-179	620.00
IUUC-Sit-110618	Setaria italica	60.72	5.00e-137	481.00
IUUC-Sly-110921	Solanum lycopersicum	67.30	5.00e-152	531.00
IUUC-Stu-112404	Solanum tuberosum	57.69	2.00e-131	462.00
IUUC-Sbi-114046	Sorghum bicolor	62.32	2.00e-139	489.00
IUUC-Tca-121720	Theobroma cacao	66.90	1.00e-157	549.00
IUUC-Tae-124159	Triticum aestivum	60.63	6.00e-136	477.00
IUUC-Tur-126636	Triticum urartu	59.17	1.00e-125	444.00
IUUC-Vvi-131473	Vitis vinifera	67.83	3.00e-155	542.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence