iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tur-126787

Ensembl Protein ID

TRIUR3_23167-P1

UniProt Accession

M7YY80; M7YY80_TRIUA

Genbank Protein ID

EMS52131.1

Protein Name

WD repeat-containing protein 6

Genbank Nucleotide ID

KD211124

Gene Name

TRIUR3_23167

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TRIUR3_23167	TRIUR3_23167-T1	TRIUR3_23167-P1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.60e-16	59.0	1201	1221

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 13   d.tllvsGsdDgtikvWDlrt 32
           d  ++vsGs Dg+i +WDl++
   Q: 1201 DrYIIVSGSTDGSITLWDLTD 1221
           44569*************986 PP

Organism

Triticum urartu

Protein Sequence
(Fasta)

MADMSPDMHY APTRNEEASD QRSIRIKSFA LKPGEDVTES YVCRTRRCRA FGVWIGQIVK 60
TYNYINRVDI TLPLTVYEGI FLKLLRPPTA ASKVVIDAAL DKIDASSKVV IDAALDKIDD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCAGACA TGAGCCCAGA CATGCATTAC GCCCCCACAA GGAACGAGGA AGCATCCGAT 60
CAACGGTCAA TAAGAATCAA AAGCTTTGCT CTGAAGCCAG GTCTGACAAG ATTGAAGCAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000976	Aegilops tauschii	87.46	0.00e+00	1772.00
IUUC-Aml-001786	Ailuropoda melanoleuca	22.54	7.00e-32	132.00
IUUC-Atr-003053	Amborella trichopoda	42.42	0.00e+00	1056.00
IUUC-Apl-003178	Anas platyrhynchos	23.64	6.00e-07	48.10
IUUC-Aca-004886	Anolis carolinensis	23.14	3.00e-36	146.00
IUUC-Aly-005509	Arabidopsis lyrata	43.57	0.00e+00	1004.00
IUUC-Ath-007109	Arabidopsis thaliana	44.74	0.00e+00	1001.00
IUUC-Ani-009359	Aspergillus nidulans	23.17	1.00e-15	78.20
IUUC-Aor-010056	Aspergillus oryzae	22.70	1.00e-16	81.30
IUUC-Ate-010299	Aspergillus terreus	20.46	2.00e-12	67.80
IUUC-Ame-011051	Astyanax mexicanus	22.08	2.00e-23	103.00
IUUC-Bta-012793	Bos taurus	22.69	3.00e-33	136.00
IUUC-Bci-013679	Botrytis cinerea	23.62	4.00e-09	56.60
IUUC-Bdi-014401	Brachypodium distachyon	80.08	0.00e+00	1968.00
IUUC-Bol-015628	Brassica oleracea	44.73	0.00e+00	957.00
IUUC-Bra-017446	Brassica rapa	44.70	0.00e+00	988.00
IUUC-Cja-018910	Callithrix jacchus	22.63	2.00e-34	140.00
IUUC-Cfa-021260	Canis familiaris	22.71	4.00e-32	132.00
IUUC-Cpo-022205	Cavia porcellus	23.29	2.00e-33	137.00
IUUC-Csa-023510	Chlorocebus sabaeus	22.22	2.00e-32	134.00
IUUC-Cme-027170	Cyanidioschyzon merolae	29.79	1.00e-05	45.80
IUUC-Dre-028004	Danio rerio	22.19	2.00e-25	110.00
IUUC-Dno-029804	Dasypus novemcinctus	22.25	4.00e-32	133.00
IUUC-Dor-030512	Dipodomys ordii	23.40	6.00e-26	112.00
IUUC-Ete-033076	Echinops telfairi	27.09	1.00e-24	107.00
IUUC-Fal-036807	Ficedula albicollis	24.22	3.00e-13	69.70
IUUC-Gga-040482	Gallus gallus	21.60	7.00e-14	72.00
IUUC-Gac-042066	Gasterosteus aculeatus	23.29	1.00e-25	111.00
IUUC-Gma-042704	Glycine max	45.53	0.00e+00	1037.00
IUUC-Ggo-044942	Gorilla gorilla	22.22	7.00e-33	135.00
IUUC-Hsa-046408	Homo sapiens	22.63	3.00e-33	136.00
IUUC-Hvu-047448	Hordeum vulgare	91.43	0.00e+00	2175.00
IUUC-Itr-048756	Ictidomys tridecemlineatus	23.17	1.00e-32	134.00
IUUC-Lch-050170	Latimeria chalumnae	25.47	2.00e-41	163.00
IUUC-Lpe-051575	Leersia perrieri	67.08	0.00e+00	1697.00
IUUC-Lma-053318	Leptosphaeria maculans	21.15	2.00e-16	80.90
IUUC-Laf-054299	Loxodonta africana	21.70	2.00e-31	130.00
IUUC-Mcc-055438	Macaca mulatta	22.51	1.00e-34	141.00
IUUC-Mtr-058455	Medicago truncatula	44.88	0.00e+00	1005.00
IUUC-Mga-059962	Meleagris gallopavo	26.27	5.00e-11	62.00
IUUC-Mmr-061353	Microcebus murinus	22.51	1.00e-32	134.00
IUUC-Mdo-062061	Monodelphis domestica	23.37	9.00e-32	131.00
IUUC-Mmu-064386	Mus musculus	23.58	2.00e-29	123.00
IUUC-Mac-065653	Musa acuminata	51.36	0.00e+00	1226.00
IUUC-Mlu-068104	Myotis lucifugus	22.38	3.00e-31	130.00
IUUC-Ncr-068718	Neurospora crassa	28.57	2.00e-06	47.80
IUUC-Nle-069836	Nomascus leucogenys	22.37	4.00e-33	135.00
IUUC-Ocu-074708	Oryctolagus cuniculus	22.43	5.00e-31	129.00
IUUC-Oba-075290	Oryza barthii	70.24	0.00e+00	1736.00
IUUC-Obr-076647	Oryza brachyantha	72.43	0.00e+00	1810.00
IUUC-Ogl-077628	Oryza glaberrima	71.27	0.00e+00	1781.00
IUUC-Ogu-078209	Oryza glumaepatula	68.49	0.00e+00	1662.00
IUUC-Oin-079342	Oryza indica	71.11	0.00e+00	1748.00
IUUC-Olo-080334	Oryza longistaminata	68.62	0.00e+00	1655.00
IUUC-Oni-082311	Oryza nivara	71.11	0.00e+00	1747.00
IUUC-Opu-083195	Oryza punctata	67.35	0.00e+00	1648.00
IUUC-Oru-085006	Oryza rufipogon	70.08	0.00e+00	1731.00
IUUC-Osa-085317	Oryza sativa	71.11	0.00e+00	1776.00
IUUC-Ola-087145	Oryzias latipes	23.88	4.00e-26	113.00
IUUC-Oga-088206	Otolemur garnettii	22.61	7.00e-33	135.00
IUUC-Oar-089802	Ovis aries	23.38	1.00e-32	134.00
IUUC-Pan-092782	Papio anubis	22.37	6.00e-33	135.00
IUUC-Ppa-095436	Physcomitrella patens	34.64	0.00e+00	676.00
IUUC-Pfo-097423	Poecilia formosa	22.09	5.00e-23	102.00
IUUC-Pab-097763	Pongo abelii	22.89	6.00e-33	135.00
IUUC-Pop-099090	Populus trichocarpa	43.18	0.00e+00	1035.00
IUUC-Ppe-101580	Prunus persica	44.42	0.00e+00	1041.00
IUUC-Pgr-103424	Puccinia graminis	23.68	2.00e-10	60.80
IUUC-Rno-105122	Rattus norvegicus	24.12	3.00e-34	139.00
IUUC-Sha-107208	Sarcophilus harrisii	23.97	8.00e-40	158.00
IUUC-Ssl-108576	Sclerotinia sclerotiorum	24.06	1.00e-07	52.00
IUUC-Smo-108961	Selaginella moellendorffii	29.68	5.00e-122	432.00
IUUC-Sit-109932	Setaria italica	70.07	0.00e+00	1755.00
IUUC-Sly-111685	Solanum lycopersicum	45.48	0.00e+00	1082.00
IUUC-Sar-112998	Sorex araneus	22.24	7.00e-31	128.00
IUUC-Sbi-114074	Sorghum bicolor	71.15	0.00e+00	1759.00
IUUC-Ssc-115619	Sus scrofa	29.27	1.00e-25	111.00
IUUC-Tgu-117485	Taeniopygia guttata	24.35	4.00e-13	68.90
IUUC-Tru-118104	Takifugu rubripes	23.61	2.00e-28	120.00
IUUC-Tni-119995	Tetraodon nigroviridis	22.25	8.00e-27	115.00
IUUC-Tca-121790	Theobroma cacao	45.32	0.00e+00	1076.00
IUUC-Tre-122080	Trichoderma reesei	20.90	9.00e-15	75.10
IUUC-Tvi-122306	Trichoderma virens	23.39	8.00e-11	62.00
IUUC-Tae-125371	Triticum aestivum	95.47	0.00e+00	2423.00
IUUC-Tme-126957	Tuber melanosporum	26.75	3.00e-06	46.20
IUUC-Ttr-128387	Tursiops truncatus	28.69	1.00e-25	111.00
IUUC-Vvi-131701	Vitis vinifera	47.13	0.00e+00	1091.00
IUUC-Xma-134014	Xiphophorus maculatus	21.78	3.00e-20	93.20
IUUC-Yli-134589	Yarrowia lipolytica	27.41	1.00e-11	64.70

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence