iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Fal-037621

Ensembl Protein ID

ENSFALP00000005512.1

UniProt Accession

U3JRV8; U3JRV8_FICAL

Genbank Protein ID

ENSFALP00000005512

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AGTO01011648

Gene Name

RNF13

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSFALG00000005284.1	ENSFALT00000005538.1	ENSFALP00000005512.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	3.30e-09	36.8	240	282

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           CaiCl++++dg  +++lpC H++h +C+  w     +++++ +CP+C+
   Q: 240  CAICLDEYEDGdkLRILPCSHAYHCKCVDPW-----LTKTKKTCPVCK 282
           ********66666******************.....899********7 PP

Organism

Ficedula albicollis

Protein Sequence
(Fasta)

MLLSIGMLML SATQIYTIVT VQLFAFLNLL PVEADILAYN LENGTQTFDD LPARFGYRLP 60
AEGLKGFLIN SKPENACEPI APPPLRDNSS GAFIVLIRRL ECNFDVKVLN AQRAGYKAAI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTATTGAATA AAATATGCTG TTATCAATAG GAATGCTGAT GTTGTCTGCC ACTCAGATAT 60
ACACTATTGT GACTGTGCAG TTATTTGCCT TCCTGAATCT TTTACCTGTG GAGGCAGATA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR003137--PA_domain
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF02225--PA
PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0005829--C:cytosol
GO:0016021--C:integral component of membrane
GO:0031902--C:late endosome membrane
GO:0005765--C:lysosomal membrane
GO:0005654--C:nucleoplasm
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0051865--P:protein autoubiquitination

KEGG

fab:101819569

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000889	Aegilops tauschii	28.41	2.00e-18	87.00
IUUC-Aml-001909	Ailuropoda melanoleuca	90.29	3.00e-177	614.00
IUUC-Atr-003055	Amborella trichopoda	31.80	4.00e-31	128.00
IUUC-Apl-004022	Anas platyrhynchos	95.01	2.00e-179	621.00
IUUC-Aca-004641	Anolis carolinensis	88.02	8.00e-171	592.00
IUUC-Aly-006519	Arabidopsis lyrata	32.55	4.00e-33	134.00
IUUC-Ath-007212	Arabidopsis thaliana	33.00	7.00e-31	127.00
IUUC-Acl-008256	Aspergillus clavatus	58.33	5.00e-14	71.60
IUUC-Afl-008548	Aspergillus flavus	60.00	1.00e-13	70.10
IUUC-Afu-008977	Aspergillus fumigatus	60.00	3.00e-13	69.30
IUUC-Ani-009337	Aspergillus nidulans	46.30	3.00e-13	68.60
IUUC-Ang-009734	Aspergillus niger	60.00	6.00e-14	71.60
IUUC-Aor-010134	Aspergillus oryzae	44.00	8.00e-14	71.20
IUUC-Ate-010329	Aspergillus terreus	60.00	2.00e-13	70.10
IUUC-Ame-010635	Astyanax mexicanus	74.72	4.00e-141	494.00
IUUC-Bgr-012131	Blumeria graminis	50.00	2.00e-12	67.80
IUUC-Bta-012593	Bos taurus	90.29	0.00e+00	633.00
IUUC-Bci-013936	Botrytis cinerea	33.73	2.00e-13	70.10
IUUC-Bdi-014479	Brachypodium distachyon	32.14	6.00e-28	117.00
IUUC-Bol-015396	Brassica oleracea	30.23	9.00e-23	100.00
IUUC-Bra-017689	Brassica rapa	33.81	6.00e-34	138.00
IUUC-Cel-018181	Caenorhabditis elegans	32.78	9.00e-30	124.00
IUUC-Cja-019353	Callithrix jacchus	89.76	4.00e-175	606.00
IUUC-Cfa-020234	Canis familiaris	90.55	2.00e-177	614.00
IUUC-Cpo-021602	Cavia porcellus	87.76	2.00e-150	525.00
IUUC-Cre-022983	Chlamydomonas reinhardtii	37.93	1.00e-10	60.50
IUUC-Csa-023201	Chlorocebus sabaeus	90.29	1.00e-176	612.00
IUUC-Cho-024954	Choloepus hoffmanni	75.59	3.00e-142	497.00
IUUC-Cin-025554	Ciona intestinalis	43.00	6.00e-62	230.00
IUUC-Csv-025959	Ciona savignyi	43.68	1.00e-51	197.00
IUUC-Cgl-026762	Colletotrichum gloeosporioides	57.78	2.00e-13	70.10
IUUC-Cne-026954	Cryptococcus neoformans	53.19	6.00e-13	68.90
IUUC-Dre-028744	Danio rerio	78.46	2.00e-138	484.00
IUUC-Dno-029675	Dasypus novemcinctus	89.24	6.00e-176	609.00
IUUC-Dor-030791	Dipodomys ordii	74.80	3.00e-131	461.00
IUUC-Dse-031406	Dothistroma septosporum	43.33	2.00e-12	67.80
IUUC-Dme-031765	Drosophila melanogaster	43.55	8.00e-52	197.00
IUUC-Ete-032577	Echinops telfairi	83.02	4.00e-142	496.00
IUUC-Eca-034148	Equus caballus	90.81	2.00e-176	611.00
IUUC-Eeu-034552	Erinaceus europaeus	89.50	2.00e-171	594.00
IUUC-Fca-036021	Felis catus	91.08	1.00e-177	615.00
IUUC-Fox-037990	Fusarium oxysporum	57.78	3.00e-13	69.70
IUUC-Fso-038278	Fusarium solani	57.78	6.00e-13	68.60
IUUC-Gmo-039485	Gadus morhua	72.16	1.00e-135	475.00
IUUC-Ggr-039870	Gaeumannomyces graminis	53.33	2.00e-12	67.00
IUUC-Gga-041166	Gallus gallus	96.33	0.00e+00	630.00
IUUC-Gac-042124	Gasterosteus aculeatus	77.19	5.00e-131	460.00
IUUC-Gma-043776	Glycine max	30.83	3.00e-26	112.00
IUUC-Ggo-045344	Gorilla gorilla	90.03	3.00e-176	610.00
IUUC-Hsa-045960	Homo sapiens	90.03	3.00e-176	610.00
IUUC-Hvu-047136	Hordeum vulgare	34.65	2.00e-28	119.00
IUUC-Itr-048327	Ictidomys tridecemlineatus	90.03	2.00e-178	617.00
IUUC-Lch-050635	Latimeria chalumnae	82.50	2.00e-136	478.00
IUUC-Lpe-051192	Leersia perrieri	33.86	4.00e-30	125.00
IUUC-Loc-052869	Lepisosteus oculatus	80.43	2.00e-145	508.00
IUUC-Lma-053199	Leptosphaeria maculans	56.25	5.00e-14	72.00
IUUC-Laf-054477	Loxodonta africana	90.03	2.00e-176	611.00
IUUC-Mcc-055232	Macaca mulatta	90.29	1.00e-176	612.00
IUUC-Meu-056237	Macropus eugenii	81.62	3.00e-116	410.00
IUUC-Mor-057236	Magnaporthe oryzae	57.78	2.00e-13	70.10
IUUC-Mpo-057522	Magnaporthe poae	44.44	2.00e-13	70.50
IUUC-Mtr-058129	Medicago truncatula	33.46	2.00e-28	119.00
IUUC-Mla-059171	Melampsora laricipopulina	34.94	4.00e-11	62.80
IUUC-Mga-059780	Meleagris gallopavo	96.33	0.00e+00	629.00
IUUC-Mvi-060468	Microbotryum violaceum	46.00	2.00e-12	67.40
IUUC-Mmr-061384	Microcebus murinus	90.81	1.00e-171	595.00
IUUC-Mdo-062781	Monodelphis domestica	89.79	3.00e-176	610.00
IUUC-Mmu-063727	Mus musculus	86.88	2.00e-164	571.00
IUUC-Mac-065216	Musa acuminata	32.63	2.00e-29	123.00
IUUC-Mpu-066497	Mustela putorius furo	90.81	2.00e-177	614.00
IUUC-Mlu-067654	Myotis lucifugus	90.99	3.00e-111	394.00
IUUC-Nfi-068514	Neosartorya fischeri	60.00	2.00e-13	69.70
IUUC-Ncr-068771	Neurospora crassa	52.00	2.00e-13	70.10
IUUC-Nle-069368	Nomascus leucogenys	90.03	3.00e-176	610.00
IUUC-Opr-070934	Ochotona princeps	63.52	2.00e-105	375.00
IUUC-Ont-071868	Oreochromis niloticus	76.80	1.00e-129	456.00
IUUC-Oan-072733	Ornithorhynchus anatinus	86.48	3.00e-104	370.00
IUUC-Ocu-074083	Oryctolagus cuniculus	88.45	3.00e-174	603.00
IUUC-Oba-075841	Oryza barthii	33.44	6.00e-28	118.00
IUUC-Obr-076703	Oryza brachyantha	35.82	3.00e-31	129.00
IUUC-Ogl-077861	Oryza glaberrima	35.46	1.00e-30	127.00
IUUC-Ogu-078205	Oryza glumaepatula	35.18	4.00e-28	119.00
IUUC-Oin-080138	Oryza indica	32.23	1.00e-28	120.00
IUUC-Olo-081024	Oryza longistaminata	34.04	2.00e-29	124.00
IUUC-Ome-081844	Oryza meridionalis	35.46	1.00e-30	127.00
IUUC-Oni-082382	Oryza nivara	31.91	3.00e-30	126.00
IUUC-Opu-083162	Oryza punctata	36.17	8.00e-31	128.00
IUUC-Oru-085122	Oryza rufipogon	33.11	1.00e-28	120.00
IUUC-Osa-086175	Oryza sativa	34.40	9.00e-31	127.00
IUUC-Ola-086440	Oryzias latipes	75.33	6.00e-117	413.00
IUUC-Oga-088291	Otolemur garnettii	86.25	1.00e-160	559.00
IUUC-Oar-089911	Ovis aries	90.03	0.00e+00	632.00
IUUC-Ptr-091166	Pan troglodytes	90.03	3.00e-176	610.00
IUUC-Pan-092154	Papio anubis	90.29	1.00e-176	612.00
IUUC-Psi-093062	Pelodiscus sinensis	93.44	9.00e-174	602.00
IUUC-Pma-094545	Petromyzon marinus	73.21	8.00e-26	107.00
IUUC-Pno-094907	Phaeosphaeria nodorum	60.00	5.00e-14	72.00
IUUC-Ppa-095928	Physcomitrella patens	33.71	4.00e-31	128.00
IUUC-Pfo-097232	Poecilia formosa	77.12	2.00e-132	464.00
IUUC-Pab-097909	Pongo abelii	89.76	0.00e+00	627.00
IUUC-Pop-099688	Populus trichocarpa	30.94	6.00e-22	97.80
IUUC-Pca-100724	Procavia capensis	75.07	3.00e-133	467.00
IUUC-Ppe-101605	Prunus persica	31.99	5.00e-28	117.00
IUUC-Pva-102624	Pteropus vampyrus	84.78	2.00e-156	544.00
IUUC-Pgr-103420	Puccinia graminis	55.32	2.00e-12	68.20
IUUC-Ptt-103943	Puccinia triticina	44.44	5.00e-11	62.00
IUUC-Pte-104147	Pyrenophora teres	57.78	1.00e-13	70.50
IUUC-Pyt-104748	Pyrenophora triticirepentis	60.00	1.00e-13	70.90
IUUC-Rno-105109	Rattus norvegicus	84.25	5.00e-157	546.00
IUUC-Sha-107563	Sarcophilus harrisii	89.79	1.00e-170	592.00
IUUC-Spo-108083	Schizosaccharomyces pombe	25.75	6.00e-14	71.60
IUUC-Smo-109274	Selaginella moellendorffii	36.12	6.00e-32	130.00
IUUC-Sit-110628	Setaria italica	33.57	1.00e-31	130.00
IUUC-Sly-110842	Solanum lycopersicum	29.66	2.00e-28	120.00
IUUC-Stu-112408	Solanum tuberosum	30.15	5.00e-27	115.00
IUUC-Sar-113580	Sorex araneus	50.59	3.00e-63	235.00
IUUC-Sbi-113856	Sorghum bicolor	30.03	2.00e-28	119.00
IUUC-Sre-115097	Sporisorium reilianum	51.02	8.00e-13	68.60
IUUC-Ssc-116043	Sus scrofa	90.29	3.00e-176	610.00
IUUC-Tgu-116908	Taeniopygia guttata	97.38	0.00e+00	636.00
IUUC-Tru-118219	Takifugu rubripes	78.62	4.00e-135	474.00
IUUC-Tsy-119333	Tarsius syrichta	90.29	1.00e-175	608.00
IUUC-Tni-120332	Tetraodon nigroviridis	71.77	3.00e-89	320.00
IUUC-Tca-121333	Theobroma cacao	30.80	3.00e-25	108.00
IUUC-Tre-121885	Trichoderma reesei	55.56	2.00e-12	67.00
IUUC-Tvi-122633	Trichoderma virens	40.58	1.00e-12	67.40
IUUC-Tae-125320	Triticum aestivum	31.52	3.00e-30	125.00
IUUC-Tur-126455	Triticum urartu	31.80	3.00e-27	115.00
IUUC-Tme-127069	Tuber melanosporum	60.00	4.00e-13	68.90
IUUC-Tbe-127859	Tupaia belangeri	80.79	4.00e-157	546.00
IUUC-Ttr-129219	Tursiops truncatus	82.15	6.00e-151	526.00
IUUC-Uma-129559	Ustilago maydis	52.08	1.00e-12	68.20
IUUC-Vda-129899	Verticillium dahliae	43.40	4.00e-13	68.90
IUUC-Vpa-130314	Vicugna pacos	87.14	5.00e-165	573.00
IUUC-Vvi-131355	Vitis vinifera	33.59	3.00e-29	122.00
IUUC-Xtr-132114	Xenopus tropicalis	76.94	4.00e-135	474.00
IUUC-Xma-133474	Xiphophorus maculatus	77.12	2.00e-132	464.00
IUUC-Yli-134442	Yarrowia lipolytica	44.68	3.00e-12	65.90
IUUC-Zma-134793	Zea mays	32.17	1.00e-30	127.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence